Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL354950.2-201ENST00000617939 290 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 AC005609.4-201ENST00000625071 447 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.86□□□□□ -2.27
UPK1AO00322 MTND4P5-201ENST00000435821 1374 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
UPK1AO00322 Y_RNA.123-201ENST00000363338 102 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 Y_RNA.169-201ENST00000363745 96 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 RNU6-1286P-201ENST00000383871 107 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 RNU5A-6P-201ENST00000384136 116 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 RNU6-57P-201ENST00000411348 103 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 RPS26P42-201ENST00000413485 326 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 AC073464.1-201ENST00000429823 534 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 DYNLT3P2-201ENST00000442517 295 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.85□□□□□ -2.27
UPK1AO00322 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 RNU6-1053P-201ENST00000515930 101 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 AC004492.1-201ENST00000607036 742 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.85□□□□□ -2.27
UPK1AO00322 AL133216.2-202ENST00000634512 349 ntBASIC0.85□□□□□ -2.27
UPK1AO00322 SNORA33-201ENST00000363664 130 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 Y_RNA.159-201ENST00000363674 87 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 RNU6-1317P-201ENST00000364582 104 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 RNU6-1080P-201ENST00000383982 107 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 SNORA70.7-201ENST00000384159 133 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.84□□□□□ -2.27
UPK1AO00322 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.84□□□□□ -2.27
UPK1AO00322 AC073415.1-201ENST00000449240 153 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 MTCO3P8-201ENST00000453691 755 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 TPTE2P5-203ENST00000458118 728 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 RPS29P27-201ENST00000463711 170 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
UPK1AO00322 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.84□□□□□ -2.27
UPK1AO00322 RNU6-189P-201ENST00000516120 101 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 AC024995.1-201ENST00000523014 93 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 AC104576.1-201ENST00000524225 88 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 AC025423.5-201ENST00000550230 219 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 AC097065.2-201ENST00000608159 533 ntBASIC0.84□□□□□ -2.27
UPK1AO00322 FER-210ENST00000628534 558 ntTSL 5 BASIC0.84□□□□□ -2.27
UPK1AO00322 RNU5B-2P-201ENST00000363036 113 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 SNORD114-27-201ENST00000363766 70 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 MIR222-201ENST00000384992 110 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 RNA5SP467-201ENST00000391274 118 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 RN7SKP142-201ENST00000411236 328 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 CDK8P2-201ENST00000415020 547 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.83□□□□□ -2.28
UPK1AO00322 MTCO2P18-201ENST00000457151 658 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 RNU7-57P-201ENST00000459540 60 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 MTND3P7-201ENST00000474435 343 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 AC103851.1-201ENST00000506833 274 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 CCDC34P1-201ENST00000507441 517 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 RNA5SP404-201ENST00000517118 132 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 SUMO2P16-201ENST00000519475 264 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 MIR3664-201ENST00000579074 99 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 BX284668.6-201ENST00000606899 438 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 AC064836.2-201ENST00000609491 462 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 AL078596.1-201ENST00000624856 447 ntBASIC0.83□□□□□ -2.28
UPK1AO00322 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 MIR586-201ENST00000385035 97 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 RNA5SP109-201ENST00000391010 116 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 RPL21P1-201ENST00000399532 476 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 RNU6-1069P-201ENST00000516612 133 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 RNU1-142P-201ENST00000516682 145 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.82□□□□□ -2.28
UPK1AO00322 SCOCP1-201ENST00000554676 349 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 MTATP6P24-201ENST00000576835 677 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 FGF7P1-201ENST00000582820 288 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 AC146944.4-201ENST00000602697 718 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 AL929325.1-201ENST00000603096 117 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 HSPE1P19-201ENST00000603327 295 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 AC092747.3-201ENST00000603769 301 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 BNIP3P10-201ENST00000605360 577 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 AL357078.3-201ENST00000607528 618 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 RMST_3.1-201ENST00000611651 109 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 AC009509.4-201ENST00000619202 509 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.82□□□□□ -2.28
UPK1AO00322 AC068647.2-201ENST00000637380 353 ntBASIC0.82□□□□□ -2.28
UPK1AO00322 RNY1P10-201ENST00000363268 113 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 Y_RNA.287-201ENST00000364853 94 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 RNU6-933P-201ENST00000384424 107 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 AL356776.1-201ENST00000406574 447 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK1AO00322 AC008134.1-201ENST00000420943 193 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.81□□□□□ -2.28
UPK1AO00322 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.81□□□□□ -2.28
UPK1AO00322 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK1AO00322 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK1AO00322 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK1AO00322 Y_RNA.638-201ENST00000459374 113 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 MTCO3P38-201ENST00000468910 766 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 RNU1-117P-201ENST00000517041 158 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 CENPUP1-201ENST00000526649 1202 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 CBX3P8-201ENST00000532412 525 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
UPK1AO00322 MRPS36P4-201ENST00000534436 298 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.81□□□□□ -2.28
UPK1AO00322 AC087683.1-201ENST00000591187 441 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 AC073648.5-201ENST00000603502 305 ntBASIC0.81□□□□□ -2.28
UPK1AO00322 AL391646.1-201ENST00000603860 190 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms