Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 Y_RNA.160-201ENST00000363677 92 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 SNORA18.2-201ENST00000383865 132 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 MIR499A-201ENST00000384903 122 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 MIR518A2-201ENST00000384966 87 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 MIR597-201ENST00000384968 97 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 RNU6-876P-201ENST00000391295 104 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC096920.1-201ENST00000423991 241 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 USP9YP30-201ENST00000430729 455 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 RPL23AP75-201ENST00000491601 451 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC114801.2-201ENST00000503825 781 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 RNA5SP490-201ENST00000517141 136 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 CBX3P4-201ENST00000538909 354 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 MIR4790-201ENST00000577799 79 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC026271.5-201ENST00000577873 130 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 MIR4255-201ENST00000579351 72 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 FGF7P1-201ENST00000582820 288 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC010928.2-201ENST00000588017 287 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC016727.2-201ENST00000603988 621 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC124303.1-201ENST00000605703 360 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC122108.2-201ENST00000611946 526 ntBASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.45□□□□□ -2.18
NKX2-6A6NCS4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 CBX3P1-201ENST00000325243 554 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 SNORD114-6-201ENST00000364393 72 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 RNU6-784P-201ENST00000384330 106 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 MIR548F5-201ENST00000408421 86 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 RPL23AP6-201ENST00000446637 472 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AC079354.2-201ENST00000453523 154 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 RNU7-14P-201ENST00000459331 62 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 TOMM22P6-201ENST00000465035 409 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AC087477.1-201ENST00000465747 340 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 RNA5SP137-201ENST00000516833 135 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AC104581.2-201ENST00000572227 430 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AC011712.1-201ENST00000588959 234 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AC243960.4-201ENST00000600532 288 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AP000654.2-201ENST00000605633 586 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AC009994.1-201ENST00000606889 253 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 uc_338.5-201ENST00000611839 155 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AL359314.1-201ENST00000616913 261 ntBASIC1.44□□□□□ -2.18
NKX2-6A6NCS4 AL391987.6-201ENST00000305671 199 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 Y_RNA.390-201ENST00000383932 102 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 RNU6-842P-201ENST00000384269 107 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 Y_RNA.533-201ENST00000384596 114 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 MT-TL1-201ENST00000386347 75 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 RNU11-3P-201ENST00000391111 133 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 RNA5SP450-201ENST00000411206 102 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 MTND3P8-201ENST00000412909 339 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AC004965.1-201ENST00000413033 213 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 HSPE1P21-201ENST00000438283 308 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 MTND1P17-201ENST00000448961 204 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AC009474.2-201ENST00000451383 136 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 MTND5P5-201ENST00000503764 376 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 RNU7-30P-201ENST00000516835 62 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AC015720.1-201ENST00000565251 277 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
NKX2-6A6NCS4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 RNU6-545P-201ENST00000362681 104 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 Y_RNA.184-201ENST00000363884 108 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 RNU6-1013P-201ENST00000384180 107 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 SNORD14D-201ENST00000384390 87 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 MIR32-201ENST00000384965 70 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 MIR1283-2-201ENST00000408621 87 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 RNU6-1304P-201ENST00000411374 106 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 AC004866.1-201ENST00000411748 78 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 MTND4P17-201ENST00000470444 350 ntBASIC1.42□□□□□ -2.18
NKX2-6A6NCS4 ACA59.1-201ENST00000515966 143 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms