Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC104389.3-201ENST00000445629 235 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 FCF1P4-201ENST00000448326 183 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 MTND5P22-201ENST00000458380 195 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AC010469.2-201ENST00000496412 480 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 CKS1BP2-201ENST00000497342 240 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 RNA5SP148-201ENST00000516527 94 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AC022616.8-201ENST00000533569 253 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 LARP7P3-201ENST00000579888 337 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AC008737.2-201ENST00000599446 118 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AL390123.1-201ENST00000603216 237 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AC136443.5-201ENST00000603741 370 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AL355297.3-201ENST00000604082 446 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 MIR7106-201ENST00000612419 65 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 MIR6817-201ENST00000615588 66 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 U6.92-201ENST00000636464 89 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.4□□□□□ -2.02
TCRBV7S3A2A0A539 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TCRBV7S3A2A0A539 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
TCRBV7S3A2A0A539 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.4□□□□□ -2.02
TCRBV7S3A2A0A539 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AC016717.2-201ENST00000609089 5141 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 RNU1-23P-201ENST00000363361 144 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.179-201ENST00000363844 90 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-546P-201ENST00000383991 107 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 RNU1-138P-201ENST00000384093 164 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 SNORA51.11-201ENST00000384442 131 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 MIR196B-201ENST00000384852 84 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 MIR561-201ENST00000385216 97 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 SNORD78.2-201ENST00000391076 69 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 MRPL35P1-201ENST00000404272 572 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AL139095.1-201ENST00000404326 391 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 RNU2-48P-201ENST00000410694 191 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AC073910.1-201ENST00000445047 438 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 U8.20-201ENST00000459445 131 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AC091179.3-201ENST00000474761 144 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 RPS23P5-201ENST00000495419 428 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.683-201ENST00000516508 93 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-1098P-201ENST00000516772 96 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AC109329.2-201ENST00000519658 482 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 MIR5006-201ENST00000583027 110 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AL355297.2-201ENST00000604792 129 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AC046143.2-201ENST00000609789 160 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 U4atac.1-201ENST00000618345 95 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AL078596.1-201ENST00000624856 447 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 MIR1291-201ENST00000627649 87 ntBASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.4□□□□□ -2.03
TCRBV7S3A2A0A539 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.153-201ENST00000363615 91 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-450P-201ENST00000364654 107 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-234P-201ENST00000365229 104 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.458-201ENST00000384240 102 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 SNORA67.2-201ENST00000384300 149 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.595-201ENST00000410403 105 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 RNU2-32P-201ENST00000411193 191 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 AC010095.1-201ENST00000443543 144 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 AC067942.3-201ENST00000512025 362 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 SNORA31.26-201ENST00000517250 137 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 MZT1P2-201ENST00000604387 248 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 AC103810.6-201ENST00000606708 136 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 MTND5P35-201ENST00000557537 1720 ntBASIC2.39□□□□□ -2.03
TCRBV7S3A2A0A539 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 SNORD56.5-201ENST00000364281 72 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 Y_RNA.276-201ENST00000364732 109 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 MIR548F4-201ENST00000408515 105 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 SNORD12B-201ENST00000410433 91 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 RNA5SP184-201ENST00000411071 108 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 RPS15AP28-201ENST00000435088 386 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 AC018634.1-201ENST00000437554 401 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 RPEP5-201ENST00000441137 268 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 AC018868.1-201ENST00000491307 315 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 AC074133.1-201ENST00000515696 183 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 SNORD11B-201ENST00000607707 90 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 AC240442.1-201ENST00000616055 283 ntBASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
TCRBV7S3A2A0A539 Z82195.2-201ENST00000612348 18351 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AC135776.4-201ENST00000624300 1904 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 RNU6-611P-201ENST00000384276 104 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 RNA5SP504-201ENST00000410676 117 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 RNA5SP492-201ENST00000411330 114 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AL358176.2-201ENST00000425769 204 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 IFNA11P-201ENST00000446352 526 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AL513328.1-201ENST00000446460 224 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 PCNPP5-201ENST00000452246 481 ntBASIC2.37□□□□□ -2.03
TCRBV7S3A2A0A539 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms