Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU4-5P-201ENST00000607255 135 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 AC092574.1-201ENST00000609771 420 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 AC006001.4-201ENST00000622243 395 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR1-1-201ENST00000362147 71 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-552P-201ENST00000362869 119 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORD114-26-201ENST00000363543 72 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR1287-201ENST00000408492 90 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU2-3P-201ENST00000410144 191 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORD83.1-201ENST00000411362 77 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 RPS3AP3-201ENST00000411933 242 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 MTND1P32-201ENST00000433043 938 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 MTND2P30-201ENST00000456663 382 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 AC091874.1-201ENST00000511402 339 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORA40.12-201ENST00000516329 111 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU2-10P-201ENST00000516375 211 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR3612-201ENST00000579753 87 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR4300-201ENST00000581016 96 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 AC144521.1-201ENST00000607148 956 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 PART1_2.1-201ENST00000612397 250 ntBASIC-0.31□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-369P-201ENST00000362515 102 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 RNY1-201ENST00000364228 113 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORD113.3-201ENST00000364630 78 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-621P-201ENST00000364752 109 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 AC106883.1-201ENST00000418805 562 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 AC006366.1-201ENST00000422002 759 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 MTND4P15-201ENST00000437913 1033 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 AC004854.1-201ENST00000440356 349 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 RN7SKP164-201ENST00000516138 266 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 7SK.7-201ENST00000603504 247 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORA28-201ENST00000606769 126 ntBASIC-0.32□□□□□ -2.46
TRAV1-2A0A0B4J238 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORA25.3-201ENST00000363205 127 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 U8.7-201ENST00000364940 136 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR644A-201ENST00000385262 94 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-679P-201ENST00000391003 106 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 CALM2P2-201ENST00000428512 440 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 AC016632.1-201ENST00000503994 196 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-567P-201ENST00000516746 107 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 AL117336.2-201ENST00000602435 335 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 RBM11P1-201ENST00000604951 799 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 AC078880.5-201ENST00000617845 421 ntBASIC-0.33□□□□□ -2.46
TRAV1-2A0A0B4J238 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-462P-201ENST00000362659 105 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-336P-201ENST00000364891 107 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-769P-201ENST00000384407 104 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR526A1-201ENST00000384897 85 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR208B-201ENST00000401172 77 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-607P-201ENST00000411283 108 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 AC092989.1-201ENST00000481235 277 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 MTND3P25-201ENST00000509243 135 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-377P-201ENST00000515965 102 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 AC025647.1-201ENST00000517879 253 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 AC023157.2-201ENST00000540596 141 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 ADI1P3-201ENST00000549509 470 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 AL158032.1-201ENST00000605401 106 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 AP002802.2-201ENST00000605877 235 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORA25.18-201ENST00000607153 114 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 AC012409.4-201ENST00000612923 249 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR1295B-201ENST00000636144 60 ntBASIC-0.34□□□□□ -2.46
TRAV1-2A0A0B4J238 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 RNA5SP432-201ENST00000362480 116 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 RNA5SP128-201ENST00000365305 116 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 SNORA36A-201ENST00000384221 132 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR145-201ENST00000384967 88 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR214-201ENST00000385214 110 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AC090960.1-201ENST00000421072 306 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 MED13P1-201ENST00000428342 171 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 MRPS10P2-201ENST00000431226 381 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 SNAP23P1-201ENST00000433229 246 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 USP9YP29-201ENST00000445112 563 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AC013470.1-201ENST00000453438 462 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AC008628.2-201ENST00000502605 298 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AC010486.2-201ENST00000505572 483 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 SCARNA8-201ENST00000515924 131 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU7-99P-201ENST00000516271 62 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU1-117P-201ENST00000517041 158 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms