Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV27A0A087WT01 SNORA4-201ENST00000584302 138 ntBASIC0.11□□□□□ -2.39
TRAV27A0A087WT01 AC131055.1-201ENST00000584626 316 ntBASIC0.11□□□□□ -2.39
TRAV27A0A087WT01 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV27A0A087WT01 AC112191.3-201ENST00000604371 277 ntBASIC0.11□□□□□ -2.39
TRAV27A0A087WT01 AC092354.1-201ENST00000606057 376 ntBASIC0.11□□□□□ -2.39
TRAV27A0A087WT01 AL391903.3-201ENST00000612158 163 ntBASIC0.11□□□□□ -2.39
TRAV27A0A087WT01 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.11□□□□□ -2.39
TRAV27A0A087WT01 Y_RNA.302-201ENST00000364997 102 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 SNORA2.2-201ENST00000365473 135 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 RNU2-70P-201ENST00000410718 179 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 RNU2-72P-201ENST00000411175 163 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 RNU6-387P-201ENST00000411331 105 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 RPS3AP3-201ENST00000411933 242 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 RPL23AP50-201ENST00000434149 455 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 AL162725.1-201ENST00000435405 301 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 AC104136.1-201ENST00000512969 394 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 AC234772.3-201ENST00000602277 528 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 AP001836.1-201ENST00000604675 523 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 AL121992.2-201ENST00000606262 256 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 MIR6515-201ENST00000619843 57 ntBASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.1□□□□□ -2.39
TRAV27A0A087WT01 RNU6-1305P-201ENST00000364353 104 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 RNU6-715P-201ENST00000365204 103 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 Y_RNA.354-201ENST00000365448 111 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 RNU6-827P-201ENST00000365553 106 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 RNU6-342P-201ENST00000384521 104 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 RNU6-1186P-201ENST00000410429 97 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AL596276.1-201ENST00000434465 418 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 RPL37P21-201ENST00000435890 276 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 STAG3L5P-204ENST00000443759 179 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AC093850.1-201ENST00000454121 251 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AC112204.1-201ENST00000502591 103 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 RNU6-1178P-201ENST00000516674 107 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AC109810.1-201ENST00000534066 224 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AC091805.2-201ENST00000603848 235 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AL078595.3-201ENST00000623815 1166 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 AL359697.1-201ENST00000624879 587 ntBASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
TRAV27A0A087WT01 SNORD115-7-201ENST00000365306 82 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 RNU6-1067P-201ENST00000384752 107 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 MIR598-201ENST00000384868 97 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 AC004866.1-201ENST00000411748 78 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 MTND3P17-201ENST00000416968 344 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 MTND1P20-201ENST00000430341 950 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 MTATP6P16-201ENST00000434543 526 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 AC104332.1-201ENST00000440471 797 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 LINC01399-202ENST00000458450 244 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 RNU7-57P-201ENST00000459540 60 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 OR9P1P-201ENST00000496431 281 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 AC105313.1-201ENST00000509121 353 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 SNORD111.1-201ENST00000516421 86 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 RNU6-1110P-201ENST00000516462 101 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 RNU7-128P-201ENST00000517247 62 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 MTND1P15-201ENST00000579262 949 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 AL162424.1-201ENST00000602325 221 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 AL021368.1-201ENST00000607490 540 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 AC004832.4-201ENST00000608952 331 ntBASIC0.08□□□□□ -2.4
TRAV27A0A087WT01 RNU6-533P-201ENST00000384144 107 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 RNU6-1257P-201ENST00000384625 110 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 MIR140-201ENST00000385282 100 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 RNU6-550P-201ENST00000391057 101 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 RPS27AP14-201ENST00000422868 454 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 CALM2P4-201ENST00000430810 426 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC074290.1-201ENST00000448883 135 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 TPT1P7-201ENST00000458300 517 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 snoU13.18-201ENST00000459483 104 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC116562.3-201ENST00000506136 177 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 HSPE1P23-201ENST00000509838 286 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 RNU6-1220P-201ENST00000517126 108 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC022868.1-201ENST00000517767 391 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC025647.1-201ENST00000517879 253 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 MTND4LP26-201ENST00000518144 282 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC068587.5-201ENST00000528506 175 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC004584.2-201ENST00000570407 410 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 TCL6_2.1-201ENST00000615162 119 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AC010487.4-201ENST00000637027 61 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 MIR924-201ENST00000638017 53 ntBASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
TRAV27A0A087WT01 SNORD115.1-201ENST00000391109 76 ntBASIC0.06□□□□□ -2.4
TRAV27A0A087WT01 U8.16-201ENST00000391279 133 ntBASIC0.06□□□□□ -2.4
TRAV27A0A087WT01 RNA5SP504-201ENST00000410676 117 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms