Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
U3KQE9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.18□□□□□ -1.9
U3KQE9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
U3KQE9 AC008555.8-201ENST00000623602 2168 ntBASIC3.18□□□□□ -1.9
U3KQE9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
U3KQE9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.18□□□□□ -1.9
U3KQE9 RNU1-32P-201ENST00000363937 159 ntBASIC3.18□□□□□ -1.9
U3KQE9 Y_RNA.369-201ENST00000365568 117 ntBASIC3.18□□□□□ -1.9
U3KQE9 Y_RNA.495-201ENST00000384435 112 ntBASIC3.18□□□□□ -1.9
U3KQE9 MIR181A2-201ENST00000384863 110 ntBASIC3.18□□□□□ -1.9
U3KQE9 MIR562-201ENST00000384894 95 ntBASIC3.18□□□□□ -1.9
U3KQE9 RNA5SP511-201ENST00000410487 115 ntBASIC3.18□□□□□ -1.9
U3KQE9 RNA5SP104-201ENST00000410989 118 ntBASIC3.18□□□□□ -1.9
U3KQE9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.18□□□□□ -1.9
U3KQE9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.18□□□□□ -1.9
U3KQE9 RPS29P33-201ENST00000456717 146 ntBASIC3.18□□□□□ -1.9
U3KQE9 RNA5SP246-201ENST00000458909 119 ntBASIC3.18□□□□□ -1.9
U3KQE9 AC008155.2-201ENST00000464337 397 ntBASIC3.18□□□□□ -1.9
U3KQE9 AC099522.1-202ENST00000514718 367 ntBASIC3.18□□□□□ -1.9
U3KQE9 SNORA18.4-201ENST00000516440 124 ntBASIC3.18□□□□□ -1.9
U3KQE9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.18□□□□□ -1.9
U3KQE9 MIR5096-201ENST00000583713 70 ntBASIC3.18□□□□□ -1.9
U3KQE9 AC025166.1-201ENST00000612411 163 ntBASIC3.18□□□□□ -1.9
U3KQE9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.18□□□□□ -1.9
U3KQE9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.18□□□□□ -1.9
U3KQE9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
U3KQE9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.18□□□□□ -1.9
U3KQE9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
U3KQE9 RNU6-486P-201ENST00000363116 107 ntBASIC3.17□□□□□ -1.9
U3KQE9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.17□□□□□ -1.9
U3KQE9 RNA5SP366-201ENST00000365454 123 ntBASIC3.17□□□□□ -1.9
U3KQE9 MIR3074-201ENST00000384885 81 ntBASIC3.17□□□□□ -1.9
U3KQE9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
U3KQE9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.17□□□□□ -1.9
U3KQE9 RPL30P4-201ENST00000429309 333 ntBASIC3.17□□□□□ -1.9
U3KQE9 RPL23AP46-201ENST00000438548 490 ntBASIC3.17□□□□□ -1.9
U3KQE9 SNORA71B-202ENST00000439232 272 ntBASIC3.17□□□□□ -1.9
U3KQE9 PPIAP15-201ENST00000479662 484 ntBASIC3.17□□□□□ -1.9
U3KQE9 OR9P1P-201ENST00000496431 281 ntBASIC3.17□□□□□ -1.9
U3KQE9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.17□□□□□ -1.9
U3KQE9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.17□□□□□ -1.9
U3KQE9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.17□□□□□ -1.9
U3KQE9 RPL23AP91-201ENST00000569211 455 ntBASIC3.17□□□□□ -1.9
U3KQE9 RN7SL703P-201ENST00000578485 302 ntBASIC3.17□□□□□ -1.9
U3KQE9 AL020997.2-201ENST00000602607 184 ntBASIC3.17□□□□□ -1.9
U3KQE9 uc_338.32-201ENST00000615087 172 ntBASIC3.17□□□□□ -1.9
U3KQE9 CR392039.5-201ENST00000623201 510 ntBASIC3.17□□□□□ -1.9
U3KQE9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
U3KQE9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
U3KQE9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
U3KQE9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
U3KQE9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.17□□□□□ -1.9
U3KQE9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
U3KQE9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
U3KQE9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
U3KQE9 Y_RNA.52-201ENST00000362760 96 ntBASIC3.16□□□□□ -1.9
U3KQE9 Y_RNA.91-201ENST00000363042 107 ntBASIC3.16□□□□□ -1.9
U3KQE9 RNA5SP509-201ENST00000364577 119 ntBASIC3.16□□□□□ -1.9
U3KQE9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.16□□□□□ -1.9
U3KQE9 SNORD14D-201ENST00000384390 87 ntBASIC3.16□□□□□ -1.9
U3KQE9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.16□□□□□ -1.9
U3KQE9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.16□□□□□ -1.9
U3KQE9 RN7SL271P-201ENST00000487601 295 ntBASIC3.16□□□□□ -1.9
U3KQE9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.16□□□□□ -1.9
U3KQE9 RNU6-113P-201ENST00000516653 101 ntBASIC3.16□□□□□ -1.9
U3KQE9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.16□□□□□ -1.9
U3KQE9 RN7SL722P-201ENST00000617780 284 ntBASIC3.16□□□□□ -1.9
U3KQE9 RN7SL565P-201ENST00000618246 284 ntBASIC3.16□□□□□ -1.9
U3KQE9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.16□□□□□ -1.9
U3KQE9 AC090517.3-201ENST00000625170 141 ntBASIC3.16□□□□□ -1.9
U3KQE9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
U3KQE9 MFSD8-236ENST00000641509 4050 ntBASIC3.16□□□□□ -1.9
U3KQE9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.16□□□□□ -1.9
U3KQE9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
U3KQE9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
U3KQE9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.15□□□□□ -1.9
U3KQE9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
U3KQE9 Y_RNA.116-201ENST00000363292 103 ntBASIC3.15□□□□□ -1.91
U3KQE9 Y_RNA.242-201ENST00000364473 110 ntBASIC3.15□□□□□ -1.91
U3KQE9 RNA5SP513-201ENST00000364648 118 ntBASIC3.15□□□□□ -1.91
U3KQE9 Y_RNA.281-201ENST00000364774 94 ntBASIC3.15□□□□□ -1.91
U3KQE9 MIR767-201ENST00000390228 109 ntBASIC3.15□□□□□ -1.91
U3KQE9 RNU11-5P-201ENST00000391216 129 ntBASIC3.15□□□□□ -1.91
U3KQE9 RNA5SP354-201ENST00000391247 136 ntBASIC3.15□□□□□ -1.91
U3KQE9 AL031121.1-201ENST00000406553 254 ntBASIC3.15□□□□□ -1.91
U3KQE9 U6atac.2-201ENST00000408644 118 ntBASIC3.15□□□□□ -1.91
U3KQE9 SNORA3C-201ENST00000408792 125 ntBASIC3.15□□□□□ -1.91
U3KQE9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.15□□□□□ -1.91
U3KQE9 HMGN2P31-201ENST00000432430 273 ntBASIC3.15□□□□□ -1.91
U3KQE9 AF228730.3-201ENST00000436691 102 ntBASIC3.15□□□□□ -1.91
U3KQE9 AC006011.1-201ENST00000442758 349 ntBASIC3.15□□□□□ -1.91
U3KQE9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.15□□□□□ -1.91
U3KQE9 RPS27P22-201ENST00000478056 241 ntBASIC3.15□□□□□ -1.91
U3KQE9 RPL31P61-201ENST00000496160 376 ntBASIC3.15□□□□□ -1.91
U3KQE9 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
U3KQE9 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
U3KQE9 RNU6-63P-201ENST00000516690 95 ntBASIC3.15□□□□□ -1.91
U3KQE9 RNU7-143P-201ENST00000516781 65 ntBASIC3.15□□□□□ -1.91
U3KQE9 MIR4765-201ENST00000585007 77 ntBASIC3.15□□□□□ -1.91
U3KQE9 AL929325.1-201ENST00000603096 117 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms