Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 RNU6-199P-201ENST00000362954 107 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-1060P-201ENST00000384664 107 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AL451046.2-201ENST00000403074 277 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AL031577.2-201ENST00000404133 280 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AC005002.2-201ENST00000438228 269 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AL031313.1-201ENST00000448435 256 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 snoU13.6-201ENST00000458785 104 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AL049830.1-201ENST00000468034 425 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU4-57P-201ENST00000515980 135 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AL359075.3-201ENST00000613288 217 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AC011155.2-201ENST00000623202 216 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 AL078595.3-201ENST00000623815 1166 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR6516-201ENST00000630554 81 ntBASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.31□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU4-48P-201ENST00000365559 182 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-83P-201ENST00000384568 112 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 MRPL42P3-201ENST00000401492 326 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORD99-201ENST00000408612 74 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-57P-201ENST00000411348 103 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 MTCO2P23-201ENST00000425216 680 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 AL606662.1-201ENST00000445763 553 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR4452-201ENST00000583004 71 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 AL357312.1-201ENST00000603879 298 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 PRELID3BP2-201ENST00000605362 201 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 TCL6_2.1-201ENST00000615162 119 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 AC009159.2-201ENST00000617603 606 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR6788-201ENST00000618842 66 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 MTND5P17-201ENST00000418405 1603 ntBASIC0.3□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORA20.2-201ENST00000383922 131 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR548J-201ENST00000408833 112 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC016909.1-201ENST00000415916 166 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC074290.1-201ENST00000448883 135 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC233266.1-201ENST00000454518 96 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 MTCO2P6-201ENST00000463134 685 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-467P-201ENST00000517027 110 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC026470.2-201ENST00000561492 181 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR151B-201ENST00000584249 96 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AL512605.2-201ENST00000592972 256 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AL360219.1-201ENST00000610230 366 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC242852.1-201ENST00000612151 96 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 AC244015.1-201ENST00000622301 99 ntBASIC0.29□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU5F-6P-201ENST00000362979 116 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORA25.9-201ENST00000365087 128 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-1200P-201ENST00000384162 107 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 Y_RNA.480-201ENST00000384364 102 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 CDK8P2-201ENST00000415020 547 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU7-57P-201ENST00000459540 60 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 Y_RNA.672-201ENST00000516289 104 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-917P-201ENST00000516294 104 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR5000-201ENST00000577717 103 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 AL157392.4-201ENST00000609756 345 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 AC138749.5-201ENST00000611461 208 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 AC009878.1-201ENST00000621819 340 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 AL049777.1-201ENST00000622740 518 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 AC022418.1-201ENST00000624118 445 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 MTND4P5-201ENST00000435821 1374 ntBASIC0.28□□□□□ -2.36
TMEM56-RWDD3S4R434 AL442644.1-201ENST00000454390 3105 ntBASIC0.28□□□□□ -2.37
TMEM56-RWDD3S4R434 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
TMEM56-RWDD3S4R434 AP000568.1-201ENST00000282964 442 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-1305P-201ENST00000364353 104 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-169P-201ENST00000365336 107 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 RNU6-1237P-201ENST00000384777 107 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 MTND3P17-201ENST00000416968 344 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 AC009237.7-201ENST00000447357 229 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 SNORA25.17-201ENST00000517184 124 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 AP002001.1-203ENST00000534002 267 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 AC005771.1-201ENST00000585581 349 ntBASIC0.27□□□□□ -2.37
TMEM56-RWDD3S4R434 AL162424.1-201ENST00000602325 221 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms