Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL929325.1-201ENST00000603096 117 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 AC005562.2-201ENST00000618264 111 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 uc_338.11-201ENST00000619132 160 ntBASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.78□□□□□ -2.28
USH1CQ9Y6N9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.78□□□□□ -2.29
USH1CQ9Y6N9 RNU6-1235P-201ENST00000384559 107 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 RNU6-417P-201ENST00000384712 107 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 MIR548J-201ENST00000408833 112 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 HMGN1P14-201ENST00000412459 517 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 Z99497.1-201ENST00000421282 135 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 MTCO2P34-201ENST00000421994 607 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC011233.1-201ENST00000422812 283 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 RPL31P35-201ENST00000431058 377 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 RNU6-498P-201ENST00000459468 107 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 RNU6-1146P-201ENST00000516282 102 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC104458.1-201ENST00000608243 463 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC021506.2-201ENST00000612354 169 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC009509.4-201ENST00000619202 509 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 AC006001.4-201ENST00000622243 395 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 MTND4P4-201ENST00000439033 1366 ntBASIC0.77□□□□□ -2.29
USH1CQ9Y6N9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC009541.1-201ENST00000438279 2662 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 RNU4-48P-201ENST00000365559 182 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 RNA5SP323-201ENST00000391094 133 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC010154.1-201ENST00000425857 269 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC004386.2-201ENST00000441858 148 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 RPL39P38-201ENST00000467018 153 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 RNU6-1129P-201ENST00000515964 104 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC016957.1-201ENST00000534895 309 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 TPRKBP2-201ENST00000565969 475 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 MIR5006-201ENST00000583027 110 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 Z99497.2-201ENST00000603634 310 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AL136370.1-201ENST00000608166 691 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AP001596.2-201ENST00000608410 312 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC006566.1-201ENST00000608943 513 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 AL359697.1-201ENST00000624879 587 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
USH1CQ9Y6N9 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 RNU6-975P-201ENST00000384296 105 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 RNU6-950P-201ENST00000384651 107 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 MIR549A-201ENST00000385268 96 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 MIR1253-201ENST00000408273 105 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 AC016727.2-201ENST00000603988 621 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 RNU6-85P-201ENST00000605989 107 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 AC092354.1-201ENST00000606057 376 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 AC008163.1-202ENST00000636004 2889 ntBASIC0.75□□□□□ -2.29
USH1CQ9Y6N9 RNU6-910P-201ENST00000390844 107 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 RNA5SP467-201ENST00000391274 118 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 SNORA31.2-201ENST00000516019 134 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 RNU6-1069P-201ENST00000516612 133 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 AP001372.4-201ENST00000524889 472 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 MTATP6P3-201ENST00000581686 676 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 TCL6_2.1-201ENST00000615162 119 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 AC022709.1-201ENST00000615967 87 ntBASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.74□□□□□ -2.29
USH1CQ9Y6N9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 RNY1-201ENST00000364228 113 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 Y_RNA.287-201ENST00000364853 94 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 RNU6-1031P-201ENST00000384773 107 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 RAB28P5-201ENST00000427490 651 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 NFU1P2-201ENST00000448700 469 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 AC024995.1-201ENST00000523014 93 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms