Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 SNORD63-201ENST00000384262 68 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 RNU6-713P-201ENST00000384761 107 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 MIR95-201ENST00000385072 81 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 SNORD115-46-201ENST00000390982 71 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 Y_RNA.597-201ENST00000410463 100 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 AC027124.2-201ENST00000428249 105 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 AL445305.1-201ENST00000432577 575 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 AC004386.2-201ENST00000441858 148 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 LINC01399-202ENST00000458450 244 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 RPL26P26-201ENST00000480251 434 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 RNU2-44P-201ENST00000516795 194 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 RNU6-586P-201ENST00000517265 104 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 HSPE1P18-201ENST00000517602 280 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 FAM35CP-201ENST00000554755 2470 ntBASIC2.91□□□□□ -1.94
PCDHA13Q9Y5I0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
PCDHA13Q9Y5I0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PCDHA13Q9Y5I0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PCDHA13Q9Y5I0 MIR422A-201ENST00000362286 90 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.64-201ENST00000362845 102 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.193-201ENST00000363979 102 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-26P-201ENST00000383985 107 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-574P-201ENST00000384265 107 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 MIR549A-201ENST00000385268 96 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 AC009237.7-201ENST00000447357 229 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 EEF1B2P7-201ENST00000451177 676 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 AC091179.3-201ENST00000474761 144 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 AC023141.11-201ENST00000508864 202 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 DEFB131C-201ENST00000528817 165 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 AC023824.2-201ENST00000566185 400 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 MZT1P2-201ENST00000604387 248 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 AC004832.5-201ENST00000608677 401 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 AC090517.3-201ENST00000625170 141 ntBASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHA13Q9Y5I0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 Z82209.1-201ENST00000422141 2135 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.222-201ENST00000364264 102 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 SNORA18.2-201ENST00000383865 132 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-926P-201ENST00000384075 107 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 MIR128-1-201ENST00000384921 82 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 SNORA48.2-201ENST00000390926 124 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 SNORA12-201ENST00000391162 147 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 MIR1294-201ENST00000408503 142 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 CYP2C59P-201ENST00000457790 269 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 RPS29P26-201ENST00000477483 171 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 SNORA40.9-201ENST00000515895 93 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-826P-201ENST00000516827 104 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AC136932.1-201ENST00000574771 208 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 MIR4325-201ENST00000583049 90 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AL162274.2-201ENST00000614406 332 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AC011476.5-201ENST00000615594 130 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDHA13Q9Y5I0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.26-201ENST00000362539 101 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.143-201ENST00000363520 106 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-461P-201ENST00000364195 107 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-702P-201ENST00000364982 107 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-806P-201ENST00000365147 105 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 RNA5SP240-201ENST00000365355 128 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 U8.9-201ENST00000365667 134 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.401-201ENST00000383965 117 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 Y_RNA.512-201ENST00000384518 102 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 RNU6-121P-201ENST00000410525 99 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 AL513477.1-202ENST00000417061 214 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 IFNA11P-201ENST00000446352 526 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 AC090515.1-201ENST00000465295 476 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 AP003733.2-201ENST00000529409 171 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 AC004486.1-201ENST00000546846 233 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 MIR5006-201ENST00000583027 110 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.88□□□□□ -1.95
PCDHA13Q9Y5I0 AL357075.2-201ENST00000614906 189 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms