Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AC068205.3-201ENST00000636385 468 ntBASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIT1Q9Y3P8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 AC026241.1-201ENST00000517873 2142 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 RNU6-804P-201ENST00000384286 107 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 U3.40-201ENST00000408706 208 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 AC090543.2-201ENST00000483963 348 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 SNORA31.21-201ENST00000517180 77 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 SUMO2P18-201ENST00000518873 252 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 AC079598.5-201ENST00000547460 117 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 ELOCP29-201ENST00000588193 334 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 AL136164.4-201ENST00000625013 2135 ntBASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIT1Q9Y3P8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 RNU6-655P-201ENST00000362858 107 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.121-201ENST00000363309 113 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.329-201ENST00000365209 107 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 RNU1-57P-201ENST00000384491 166 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.571-201ENST00000384753 98 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 AP000567.1-201ENST00000406413 156 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 RNA5SP504-201ENST00000410676 117 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 TOMM22P2-201ENST00000430735 237 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.637-201ENST00000459424 114 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 MTND5P41-201ENST00000517498 206 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 DEFB131C-201ENST00000528817 165 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 RPL17P51-201ENST00000605218 238 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 uc_338.32-201ENST00000615087 172 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 AL359854.1-201ENST00000614203 1594 ntBASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
SIT1Q9Y3P8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 RNU6-312P-201ENST00000364629 107 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 SNORA67.2-201ENST00000384300 149 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 RNA5SP104-201ENST00000410989 118 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AC126124.2-201ENST00000413542 321 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 BTF3P11-201ENST00000426582 477 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AL606753.1-201ENST00000427435 87 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 HMGN2P20-201ENST00000437531 273 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AC004386.2-201ENST00000441858 148 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 RPL31P41-201ENST00000477967 372 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AC145146.1-201ENST00000496370 254 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 SNORA31.1-201ENST00000515993 133 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 SNORA31.5-201ENST00000516190 133 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 MIR2682-201ENST00000580305 110 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 uc_338.1-201ENST00000612113 180 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AC006111.3-201ENST00000622137 383 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 MIR622-201ENST00000638396 96 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AL136360.1-201ENST00000503377 1900 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AC006504.1-201ENST00000562493 3666 ntBASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIT1Q9Y3P8 AL513302.2-201ENST00000562313 1842 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC069528.2-201ENST00000624849 1991 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.7-201ENST00000362352 102 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.243-201ENST00000364481 109 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.361-201ENST00000365515 120 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 RNU6-81P-201ENST00000365608 104 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms