Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNU6-165P-201ENST00000517170 99 ntBASIC0.87□□□□□ -2.27
RHBDD3Q9Y3P4 AL513534.2-201ENST00000603836 250 ntBASIC0.87□□□□□ -2.27
RHBDD3Q9Y3P4 AC080078.3-201ENST00000605407 463 ntBASIC0.87□□□□□ -2.27
RHBDD3Q9Y3P4 RNU4-38P-201ENST00000364472 129 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 RNU6-517P-201ENST00000384362 110 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 MIR549A-201ENST00000385268 96 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 MTND4P32-201ENST00000437189 1237 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AC007215.1-201ENST00000464893 276 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 TRBVA-201ENST00000498804 316 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 RNU6-232P-201ENST00000517144 64 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 SUMO2P16-201ENST00000519475 264 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AC009094.1-201ENST00000564443 426 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 MIR3124-201ENST00000582636 67 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AC234772.3-201ENST00000602277 528 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AC146944.4-201ENST00000602697 718 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AL929325.1-201ENST00000603096 117 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 Z99497.2-201ENST00000603634 310 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AC016727.2-201ENST00000603988 621 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AP000907.4-201ENST00000604143 237 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AC122133.1-201ENST00000613964 233 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 AL133216.2-202ENST00000634512 349 ntBASIC0.86□□□□□ -2.27
RHBDD3Q9Y3P4 RNU5B-2P-201ENST00000363036 113 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 RNU6-553P-201ENST00000364047 96 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 Y_RNA.287-201ENST00000364853 94 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 RNU6-417P-201ENST00000384712 107 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 AL356776.1-201ENST00000406574 447 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 RNA5SP494-201ENST00000410653 129 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 RPL23AP36-201ENST00000413895 458 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 AC010099.3-201ENST00000423896 409 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 AC016717.1-201ENST00000448918 286 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 snoU13.6-201ENST00000458785 104 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 U8.21-201ENST00000459536 136 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 RNU1-142P-201ENST00000516682 145 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 AC006001.4-201ENST00000622243 395 ntBASIC0.85□□□□□ -2.27
RHBDD3Q9Y3P4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 RNU6-181P-201ENST00000363225 107 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 SNORA33-201ENST00000363664 130 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 RNU6-1286P-201ENST00000383871 107 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 CYCSP46-201ENST00000423569 204 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 AC092473.1-201ENST00000441098 221 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 COX6CP14-201ENST00000469580 174 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 RNU6-445P-201ENST00000516949 107 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 AC025449.1-201ENST00000603896 529 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 AL359821.1-201ENST00000605519 182 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 AL359075.3-201ENST00000613288 217 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 AC137590.2-201ENST00000619709 240 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 AL513423.1-201ENST00000621695 132 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 AF246928.1-201ENST00000623768 87 ntBASIC0.84□□□□□ -2.27
RHBDD3Q9Y3P4 FGF7P2-201ENST00000332473 296 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 RNU4-79P-201ENST00000362764 141 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-1120P-201ENST00000362988 108 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 RNA5SP109-201ENST00000391010 116 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-903P-201ENST00000391270 109 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 RNU2-64P-201ENST00000411315 191 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 RNU7-57P-201ENST00000459540 60 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-323P-201ENST00000521915 107 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 TPRKBP2-201ENST00000565969 475 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 AL162424.1-201ENST00000602325 221 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 AC068792.1-201ENST00000621354 417 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 AC008873.1-201ENST00000625051 138 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 snoZ196.1-201ENST00000625269 89 ntBASIC0.83□□□□□ -2.28
RHBDD3Q9Y3P4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-1305P-201ENST00000364353 104 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-392P-201ENST00000364926 101 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-282P-201ENST00000365357 103 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-248P-201ENST00000410720 107 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 MTCO2P34-201ENST00000421994 607 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 AC244505.5-201ENST00000443639 207 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 RPS27P1-201ENST00000450552 247 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 RPS29P27-201ENST00000463711 170 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 AC025465.4-201ENST00000513422 638 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 MIR4498-201ENST00000577599 66 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 FGF7P1-201ENST00000582820 288 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 AC072046.2-201ENST00000618366 268 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 AC005609.4-201ENST00000625071 447 ntBASIC0.82□□□□□ -2.28
RHBDD3Q9Y3P4 RNU6-1240P-201ENST00000365155 104 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 RNA5SP467-201ENST00000391274 118 ntBASIC0.81□□□□□ -2.28
RHBDD3Q9Y3P4 AL034345.1-201ENST00000407768 123 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms