Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SPG7Q9UQ90 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SPG7Q9UQ90 MIR449A-201ENST00000362113 91 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 MIR410-201ENST00000362222 80 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 snoU2_19.1-201ENST00000362361 80 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 Y_RNA.83-201ENST00000363005 113 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 U3.9-201ENST00000363823 204 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 Y_RNA.199-201ENST00000364014 102 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 AL603908.1-201ENST00000406098 201 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.91□□□□□ -1.78
SPG7Q9UQ90 AC027124.2-201ENST00000428249 105 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 Z98742.2-201ENST00000431564 187 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 SUMO1P3-201ENST00000439961 304 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 RPS12P18-201ENST00000442381 270 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 SUMO1P2-201ENST00000452524 304 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 RPS3P1-201ENST00000456781 192 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 RNU1-143P-201ENST00000516296 146 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 AC079598.5-201ENST00000547460 117 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.91□□□□□ -1.78
SPG7Q9UQ90 AL162424.1-201ENST00000602325 221 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 AC022441.3-201ENST00000605737 136 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 U1.23-201ENST00000610293 146 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 RNU1-68P-201ENST00000615382 146 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 AL590240.4-201ENST00000616908 390 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 U1.39-201ENST00000621562 146 ntBASIC3.91□□□□□ -1.78
SPG7Q9UQ90 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.91□□□□□ -1.78
SPG7Q9UQ90 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SPG7Q9UQ90 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SPG7Q9UQ90 AL021368.2-201ENST00000606125 5352 ntBASIC3.9□□□□□ -1.78
SPG7Q9UQ90 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SPG7Q9UQ90 SNORA14A-201ENST00000364773 135 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 Y_RNA.418-201ENST00000384029 102 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 MTCO1P5-201ENST00000433573 344 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AL138752.1-201ENST00000452964 351 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AC091959.1-201ENST00000495857 238 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 RNU6-966P-201ENST00000516479 104 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 RNU6-1231P-201ENST00000517185 103 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 RPL21P9-201ENST00000556149 474 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AC027176.1-201ENST00000560204 514 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AC026470.2-201ENST00000561492 181 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AC004792.1-201ENST00000614523 137 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AC004467.1-201ENST00000615678 330 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AC005562.2-201ENST00000618264 111 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AC091932.3-201ENST00000624223 323 ntBASIC3.9□□□□□ -1.79
SPG7Q9UQ90 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SPG7Q9UQ90 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SPG7Q9UQ90 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.9□□□□□ -1.79
SPG7Q9UQ90 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 Y_RNA.101-201ENST00000363154 102 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 Y_RNA.415-201ENST00000384012 112 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 SNORA46.1-201ENST00000391069 153 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 RNA5SP184-201ENST00000411071 108 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 AC004386.2-201ENST00000441858 148 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 AC006539.3-201ENST00000454258 129 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 RN7SL429P-201ENST00000479090 223 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 RN7SL489P-201ENST00000486185 223 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 RN7SL327P-201ENST00000488659 223 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 RN7SL20P-201ENST00000488827 297 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 MIR4319-201ENST00000577285 85 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 RN7SL853P-201ENST00000617250 223 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 AC007318.2-201ENST00000620999 243 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 AC092628.2-201ENST00000622492 339 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.89□□□□□ -1.79
SPG7Q9UQ90 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SPG7Q9UQ90 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 Y_RNA.275-201ENST00000364726 110 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 SNORA18.2-201ENST00000383865 132 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 RNU6-651P-201ENST00000411040 105 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 AC004866.1-201ENST00000411748 78 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 AC009414.1-201ENST00000427200 443 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 Y_RNA.679-201ENST00000516416 91 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 RNU6-107P-201ENST00000516643 102 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 HSPE1P18-201ENST00000517602 280 ntBASIC3.88□□□□□ -1.79
SPG7Q9UQ90 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPG7Q9UQ90 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SPG7Q9UQ90 AC069528.2-201ENST00000624849 1991 ntBASIC3.87□□□□□ -1.79
SPG7Q9UQ90 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPG7Q9UQ90 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPG7Q9UQ90 AC062016.1-201ENST00000355719 319 ntBASIC3.87□□□□□ -1.79
SPG7Q9UQ90 Y_RNA.136-201ENST00000363444 102 ntBASIC3.87□□□□□ -1.79
SPG7Q9UQ90 SNORD56.3-201ENST00000363507 71 ntBASIC3.87□□□□□ -1.79
SPG7Q9UQ90 RNU6-301P-201ENST00000384277 107 ntBASIC3.87□□□□□ -1.79
SPG7Q9UQ90 Y_RNA.590-201ENST00000410140 107 ntBASIC3.87□□□□□ -1.79
SPG7Q9UQ90 Y_RNA.793-201ENST00000411222 111 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms