Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 RNU6-484P-201ENST00000384016 107 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 RNVU1-14-201ENST00000384770 164 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 MIR199A2-201ENST00000385289 110 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 RNU6-712P-201ENST00000410558 100 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 RNA5SP136-201ENST00000410906 107 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 Z92545.1-201ENST00000411782 234 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 CYCSP35-201ENST00000451978 304 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 RPL23AP62-201ENST00000463396 453 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 HSPE1P6-201ENST00000479457 291 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 AC021231.3-201ENST00000558497 370 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 AC099778.2-201ENST00000610904 211 ntBASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.82□□□□□ -1.64
PDZRN3Q9UPQ7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.52-201ENST00000362760 96 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.93-201ENST00000363066 109 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.243-201ENST00000364481 109 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 RPL21P3-201ENST00000395517 478 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 RNU6-1245P-201ENST00000411130 106 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 AC007215.1-201ENST00000464893 276 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 AC090515.1-201ENST00000465295 476 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 RNA5SP208-201ENST00000516156 78 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 AL160236.1-201ENST00000556317 195 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 MIR5009-201ENST00000578736 100 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 AC011471.1-201ENST00000585766 187 ntBASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDZRN3Q9UPQ7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 RNU1-62P-201ENST00000362599 164 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.587-201ENST00000391210 103 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 RNA5SP31-201ENST00000411144 127 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 AC078817.1-201ENST00000492623 435 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 RAC1P2-201ENST00000511164 579 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 RNU2-13P-201ENST00000515909 113 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 MIR4666B-201ENST00000578142 81 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 AL137843.1-201ENST00000605078 385 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 RNU1-30P-201ENST00000606575 163 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 AC006504.1-201ENST00000562493 3666 ntBASIC4.8□□□□□ -1.64
PDZRN3Q9UPQ7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.245-201ENST00000364493 95 ntBASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.432-201ENST00000384087 111 ntBASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 SNORA71B-202ENST00000439232 272 ntBASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 COX6CP6-201ENST00000490840 228 ntBASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 AC016632.1-201ENST00000503994 196 ntBASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 RNU6-365P-201ENST00000517113 106 ntBASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 MIR3922-201ENST00000585192 84 ntBASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDZRN3Q9UPQ7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 RNU1-140P-201ENST00000365040 165 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.361-201ENST00000365515 120 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 Y_RNA.415-201ENST00000384012 112 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 MIR891A-201ENST00000401237 79 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 U3.37-201ENST00000408528 213 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 SNORA36B-201ENST00000410438 131 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 CKS1BP5-201ENST00000434172 273 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 SNRPGP7-201ENST00000469016 106 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 AL049874.1-201ENST00000489560 388 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 SNORA31.8-201ENST00000516327 108 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 MIR2114-201ENST00000516645 80 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 RNU1-104P-201ENST00000517280 175 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 AC141557.1-201ENST00000540982 400 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 U73479.1-201ENST00000618062 168 ntBASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDZRN3Q9UPQ7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDZRN3Q9UPQ7 RNA5SP51-201ENST00000364750 119 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms