Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 RNA5SP513-201ENST00000364648 118 ntBASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-60P-201ENST00000364792 103 ntBASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 TOMM22P1-201ENST00000418578 312 ntBASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 RNA5SP108-201ENST00000605921 117 ntBASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 MIR376A2-201ENST00000636782 80 ntBASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 AL139811.1-201ENST00000424779 2299 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 MAPK10-349ENST00000641767 3661 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 AP000542.2-201ENST00000623199 6179 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-590P-201ENST00000365039 107 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 MIR577-201ENST00000385196 96 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 SNORA68.2-201ENST00000391263 128 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 PPIAP31-201ENST00000405422 495 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 RNA5SP296-201ENST00000410523 111 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 Y_RNA.607-201ENST00000410597 98 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 AC008155.2-201ENST00000464337 397 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 AC113410.1-201ENST00000505029 247 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 IFITM8P-201ENST00000522529 394 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 YPEL5P3-201ENST00000547227 352 ntBASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM35Q9UPQ4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AC006971.1-201ENST00000407916 4486 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 Y_RNA.4-201ENST00000362333 112 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-1010P-201ENST00000362757 107 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 Y_RNA.94-201ENST00000363068 106 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-1181P-201ENST00000384191 106 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 SNORD14D-201ENST00000384390 87 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 MIR548A2-201ENST00000384956 97 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 RBMY2UP-201ENST00000453474 324 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-221P-201ENST00000459541 99 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AC107626.1-201ENST00000471084 183 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-693P-201ENST00000516134 107 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 RN7SKP282-201ENST00000516824 299 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AC107918.3-201ENST00000533272 382 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AC011604.1-201ENST00000545978 196 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 MIR4777-201ENST00000583710 86 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 RPS15AP11-201ENST00000594193 385 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 YPEL5P2-201ENST00000605553 359 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AC006435.5-201ENST00000624486 112 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AC017071.1-201ENST00000564407 2204 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 AC139713.2-215ENST00000641428 5037 ntBASIC5.29□□□□□ -1.56
TRIM35Q9UPQ4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 RNA5SP388-201ENST00000362584 119 ntBASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 RNU7-6P-201ENST00000516845 62 ntBASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-1006P-201ENST00000516998 103 ntBASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 AC011602.1-201ENST00000546484 331 ntBASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 AC025627.2-201ENST00000576220 160 ntBASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 MAPK10-253ENST00000641010 4072 ntBASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 SCN1A-220ENST00000641603 12506 ntBASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TRIM35Q9UPQ4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 RNA5SP399-201ENST00000364003 117 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 AL133475.1-201ENST00000404414 305 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 AC009238.1-201ENST00000442165 424 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 AC009237.6-201ENST00000446969 424 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 AL162151.2-201ENST00000448875 158 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 AC068657.1-201ENST00000520807 306 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 RN7SL703P-201ENST00000578485 302 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 MIR4458-201ENST00000578872 75 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 AC026241.1-201ENST00000517873 2142 ntBASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM35Q9UPQ4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms