Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC018630.3-201ENST00000542637 96 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 AL355297.2-201ENST00000604792 129 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 AC005296.1-201ENST00000616145 209 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 AL132822.1-201ENST00000617063 513 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 AC064859.1-201ENST00000624741 174 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 AC138305.3-201ENST00000624988 240 ntBASIC2.78□□□□□ -1.96
COL20A1Q9P218 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.78□□□□□ -1.96
COL20A1Q9P218 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL20A1Q9P218 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.97
COL20A1Q9P218 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
COL20A1Q9P218 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL20A1Q9P218 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL20A1Q9P218 RNU6-222P-201ENST00000362438 107 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 RNY3P11-201ENST00000364153 102 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 SNORD32B-201ENST00000364460 84 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 Y_RNA.424-201ENST00000384063 103 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 WARS2P1-201ENST00000429678 537 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.77□□□□□ -1.97
COL20A1Q9P218 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.77□□□□□ -1.97
COL20A1Q9P218 AL118496.2-201ENST00000448300 230 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.77□□□□□ -1.97
COL20A1Q9P218 Y_RNA.721-201ENST00000517207 102 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 AC090616.3-201ENST00000582184 217 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 AC103810.6-201ENST00000606708 136 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 AC005562.2-201ENST00000618264 111 ntBASIC2.77□□□□□ -1.97
COL20A1Q9P218 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
COL20A1Q9P218 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.76□□□□□ -1.97
COL20A1Q9P218 Y_RNA.158-201ENST00000363651 101 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 Y_RNA.162-201ENST00000363683 102 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 RNU6-26P-201ENST00000383985 107 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 RNU6-1160P-201ENST00000384546 104 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 MIR10B-201ENST00000385011 110 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 MIR561-201ENST00000385216 97 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 RPL21P75-201ENST00000396599 483 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 RPL21P28-201ENST00000401418 483 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 RNU4-53P-201ENST00000410828 140 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 EIF1P2-201ENST00000428233 350 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC096644.2-201ENST00000429278 159 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC096638.1-201ENST00000444678 216 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 RPL21P39-201ENST00000463605 483 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC087190.1-201ENST00000484462 480 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC107032.1-201ENST00000485945 480 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC093591.1-201ENST00000491435 481 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 RPL21P16-201ENST00000495531 483 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 SNORA25.14-201ENST00000516481 132 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC022868.1-201ENST00000517767 391 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC023824.2-201ENST00000566185 400 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 MIR5695-201ENST00000579717 85 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 MIR5092-201ENST00000583139 88 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC023043.3-201ENST00000593113 385 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC040896.1-201ENST00000613819 479 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 TCL6_2.1-201ENST00000615162 119 ntBASIC2.76□□□□□ -1.97
COL20A1Q9P218 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL20A1Q9P218 AC016717.2-201ENST00000609089 5141 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 RNU6-879P-201ENST00000364328 108 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 MIR487A-201ENST00000385009 80 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
COL20A1Q9P218 SNORA12-201ENST00000391162 147 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.75□□□□□ -1.97
COL20A1Q9P218 AC027124.2-201ENST00000428249 105 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 AC104389.3-201ENST00000445629 235 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 AC093852.1-201ENST00000503587 266 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.75□□□□□ -1.97
COL20A1Q9P218 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.75□□□□□ -1.97
COL20A1Q9P218 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.75□□□□□ -1.97
COL20A1Q9P218 AL442163.3-201ENST00000554110 156 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 MIR5188-201ENST00000583467 113 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 RPS29P30-201ENST00000600975 111 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 SNORD58B-201ENST00000607313 66 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 PART1_1.1-201ENST00000611761 217 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 ZNF658B-202ENST00000615961 3375 ntBASIC2.75□□□□□ -1.97
COL20A1Q9P218 RNU6-873P-201ENST00000363833 107 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 SNORD14.1-201ENST00000365609 90 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 RNU6-546P-201ENST00000383991 107 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 RNU6-281P-201ENST00000384212 103 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 RNU6-738P-201ENST00000384531 106 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 MIR606-201ENST00000384851 96 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 Z98742.3-201ENST00000418637 326 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 CHEK2P4-201ENST00000450340 246 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 AC112492.4-201ENST00000456549 352 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 AC026436.1-201ENST00000510537 270 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 CYCSP23-201ENST00000519781 313 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 AC021269.2-201ENST00000532318 330 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
COL20A1Q9P218 UBL5P4-201ENST00000562584 236 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
COL20A1Q9P218 AC010999.1-201ENST00000611856 324 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 MIR1291-201ENST00000627649 87 ntBASIC2.74□□□□□ -1.97
COL20A1Q9P218 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.74□□□□□ -1.97
COL20A1Q9P218 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
COL20A1Q9P218 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL20A1Q9P218 Y_RNA.27-201ENST00000362540 103 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 RNU1-62P-201ENST00000362599 164 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 RNU6-944P-201ENST00000364023 107 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 RNY3P4-201ENST00000384428 101 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 AL139095.1-201ENST00000404326 391 ntBASIC2.73□□□□□ -1.97
COL20A1Q9P218 RN7SKP284-201ENST00000411002 343 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms