Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
HACD3Q9P035 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
HACD3Q9P035 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.94□□□□□ -2.1
HACD3Q9P035 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HACD3Q9P035 Y_RNA.48-201ENST00000362710 103 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 RNU4-9P-201ENST00000364951 139 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 RNU6-234P-201ENST00000365229 104 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 Y_RNA.404-201ENST00000383978 102 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 AL079342.1-201ENST00000401460 267 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 NCOR1P3-201ENST00000420479 303 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 PRELID3BP1-201ENST00000457142 540 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 RPL7P42-201ENST00000481005 679 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 AC132942.1-201ENST00000486753 483 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 Y_RNA.708-201ENST00000516950 96 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.94□□□□□ -2.1
HACD3Q9P035 AC016727.2-201ENST00000603988 621 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 AC009229.3-201ENST00000608056 282 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
HACD3Q9P035 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
HACD3Q9P035 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HACD3Q9P035 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HACD3Q9P035 ZNF299P-201ENST00000406845 1804 ntBASIC1.94□□□□□ -2.1
HACD3Q9P035 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HACD3Q9P035 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HACD3Q9P035 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HACD3Q9P035 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HACD3Q9P035 RNU6-1159P-201ENST00000362933 107 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 RNU6-595P-201ENST00000363944 107 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 MIR549A-201ENST00000385268 96 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 RNU2-20P-201ENST00000410425 191 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 Y_RNA.635-201ENST00000459041 101 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.93□□□□□ -2.1
HACD3Q9P035 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.93□□□□□ -2.1
HACD3Q9P035 RNU6-277P-201ENST00000516272 106 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 RNA5SP384-201ENST00000516615 116 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 Y_RNA.702-201ENST00000516843 96 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.93□□□□□ -2.1
HACD3Q9P035 DEFB131C-201ENST00000528817 165 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.93□□□□□ -2.1
HACD3Q9P035 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.93□□□□□ -2.1
HACD3Q9P035 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.93□□□□□ -2.1
HACD3Q9P035 AC090517.1-201ENST00000569307 266 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 SNRPGP17-201ENST00000603780 214 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 AC104260.1-201ENST00000616660 539 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 AC008555.8-201ENST00000623602 2168 ntBASIC1.93□□□□□ -2.1
HACD3Q9P035 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
HACD3Q9P035 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
HACD3Q9P035 Y_RNA.2-201ENST00000362330 96 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 SNORD114-1-201ENST00000362705 72 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 SNORD115-32-201ENST00000364079 82 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.92□□□□□ -2.1
HACD3Q9P035 MIR1262-201ENST00000408276 93 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 RNA5SP450-201ENST00000411206 102 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 AL035666.1-201ENST00000446195 348 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 AL137159.1-201ENST00000452808 512 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.92□□□□□ -2.1
HACD3Q9P035 snoU13.30-201ENST00000458951 104 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 AC007215.1-201ENST00000464893 276 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 RPL30P10-201ENST00000488148 337 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 ATP5EP1-201ENST00000510257 156 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.92□□□□□ -2.1
HACD3Q9P035 RNU6-991P-201ENST00000516168 107 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 RNU6-1098P-201ENST00000516772 96 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 RNU6-1213P-201ENST00000517075 94 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.92□□□□□ -2.1
HACD3Q9P035 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.92□□□□□ -2.1
HACD3Q9P035 AL132765.2-201ENST00000610812 351 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
HACD3Q9P035 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HACD3Q9P035 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
HACD3Q9P035 AC131280.1-202ENST00000624067 4211 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HACD3Q9P035 RNU1-76P-201ENST00000362903 159 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 RNU6-331P-201ENST00000384724 107 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 MIR32-201ENST00000384965 70 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 SNORA75.4-201ENST00000391278 119 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 SRIP3-201ENST00000413200 219 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 MTND4LP11-201ENST00000422184 280 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 HMGN2P18-201ENST00000450680 270 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
HACD3Q9P035 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.91□□□□□ -2.1
HACD3Q9P035 AC093259.1-201ENST00000509755 300 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 AC107393.1-201ENST00000512403 346 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.91□□□□□ -2.1
HACD3Q9P035 RNA5SP182-201ENST00000516064 82 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.91□□□□□ -2.1
HACD3Q9P035 AL109918.3-201ENST00000603072 338 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 AC113139.1-201ENST00000605049 239 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 AC005014.2-201ENST00000607795 599 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 RMST_6.1-201ENST00000611980 203 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 AC137590.2-201ENST00000619709 240 ntBASIC1.91□□□□□ -2.1
HACD3Q9P035 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms