Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC59Q9P031 Y_RNA.287-201ENST00000364853 94 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 RNU6-38P-201ENST00000384085 107 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 RNY3P9-201ENST00000384727 106 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 MIR515-2-201ENST00000384883 83 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 MIR515-1-201ENST00000384884 83 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 MIR586-201ENST00000385035 97 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 MIR634-201ENST00000385208 97 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 RNU6-174P-201ENST00000410406 106 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 RNU6-57P-201ENST00000411348 103 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 TIMM9P3-201ENST00000428659 274 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 AC007215.1-201ENST00000464893 276 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 AL163195.1-201ENST00000496941 348 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 AL133373.1-201ENST00000497098 94 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 AC092436.3-201ENST00000511788 257 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 RN7SKP298-201ENST00000515950 94 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 MIR3660-201ENST00000584845 100 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 MZT1P2-201ENST00000604387 248 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 SNRPGP20-201ENST00000604477 205 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 AL355802.3-201ENST00000607571 545 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 AC063944.3-201ENST00000609969 533 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC59Q9P031 MTND4P5-201ENST00000435821 1374 ntBASIC1.04□□□□□ -2.24
CCDC59Q9P031 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC59Q9P031 RNA5SP190-201ENST00000365222 118 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 RNA5SP259-201ENST00000365541 109 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 RNA5SP109-201ENST00000391010 116 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 RNA5SP467-201ENST00000391274 118 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 MIR1253-201ENST00000408273 105 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 RNU4-55P-201ENST00000410731 137 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 RNU6-325P-201ENST00000411132 105 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC59Q9P031 AL359672.1-201ENST00000442302 409 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 AC074290.1-201ENST00000448883 135 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC59Q9P031 RNU7-57P-201ENST00000459540 60 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 SRRM1P2-201ENST00000464531 1192 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 SNORA19.2-201ENST00000516013 114 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CCDC59Q9P031 AP000873.5-201ENST00000533906 236 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC59Q9P031 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC59Q9P031 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC59Q9P031 MIR8065-201ENST00000620577 100 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 SCARNA4-201ENST00000629045 128 ntBASIC1.03□□□□□ -2.24
CCDC59Q9P031 RNU4-20P-201ENST00000365601 151 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 MIR521-1-201ENST00000384902 87 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 RNA5SP323-201ENST00000391094 133 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC59Q9P031 RPL37P10-201ENST00000412884 288 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 MRPS10P2-201ENST00000431226 381 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 Y_RNA.654-201ENST00000497848 106 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC59Q9P031 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC59Q9P031 AL645939.4-201ENST00000604495 135 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 AC097065.2-201ENST00000608159 533 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 AC092807.2-201ENST00000609367 243 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 AC068792.1-201ENST00000621354 417 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 Z69908.1-201ENST00000622603 247 ntBASIC1.02□□□□□ -2.25
CCDC59Q9P031 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC59Q9P031 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC59Q9P031 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 RNU6-214P-201ENST00000384130 107 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 MIR487A-201ENST00000385009 80 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CCDC59Q9P031 RPL21P1-201ENST00000399532 476 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 MIR450B-201ENST00000401182 78 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 AL356776.1-201ENST00000406574 447 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC59Q9P031 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC59Q9P031 RN7SKP88-201ENST00000516847 250 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 AC024995.1-201ENST00000523014 93 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 MTND1P35-201ENST00000526739 508 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 AL161670.1-201ENST00000554348 137 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC59Q9P031 AC008088.1-201ENST00000580993 280 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 AC119751.7-201ENST00000600494 245 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 AL929325.1-201ENST00000603096 117 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 MIR8076-201ENST00000611401 83 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 7SK.8-201ENST00000612110 250 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 7SK.11-201ENST00000615477 250 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 7SK.13-201ENST00000622040 250 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 AL078596.1-201ENST00000624856 447 ntBASIC1.01□□□□□ -2.25
CCDC59Q9P031 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CCDC59Q9P031 RNU6-1123P-201ENST00000362347 106 ntBASIC1□□□□□ -2.25
CCDC59Q9P031 SNORA67.2-201ENST00000384300 149 ntBASIC1□□□□□ -2.25
CCDC59Q9P031 RNU6-784P-201ENST00000384330 106 ntBASIC1□□□□□ -2.25
CCDC59Q9P031 SNORA26.9-201ENST00000391322 122 ntBASIC1□□□□□ -2.25
CCDC59Q9P031 MIR320B2-201ENST00000408479 138 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms