Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RPS3AP12-201ENST00000443616 753 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 CHEK2P4-201ENST00000450340 246 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 AL163540.1-201ENST00000485382 386 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 Y_RNA.683-201ENST00000516508 93 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 RN7SKP295-201ENST00000517264 153 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 AC022868.1-201ENST00000517767 391 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 AC023442.1-201ENST00000531247 422 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 MIR4325-201ENST00000583049 90 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 AC007179.3-201ENST00000604976 235 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 AL138825.1-201ENST00000618587 192 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 FO624990.1-201ENST00000636373 85 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 AC068205.3-201ENST00000636385 468 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
DDX56Q9NY93 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.87□□□□□ -1.95
DDX56Q9NY93 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX56Q9NY93 AC009487.4-201ENST00000624969 3585 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 XGY1-201ENST00000381172 446 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 SNORA22B-201ENST00000383876 138 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 MIR628-201ENST00000385229 95 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX56Q9NY93 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX56Q9NY93 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX56Q9NY93 AL139132.1-201ENST00000431587 344 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 IFNA11P-201ENST00000446352 526 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 AL109933.2-201ENST00000452651 260 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 RPS29P26-201ENST00000477483 171 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 RNU6-948P-201ENST00000516374 107 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 Y_RNA.711-201ENST00000516993 102 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 RNU1-117P-201ENST00000517041 158 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 AC087441.2-201ENST00000529141 262 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 MIR5195-201ENST00000583555 115 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 AL353621.2-201ENST00000605340 133 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 AC096577.2-201ENST00000611455 153 ntBASIC2.86□□□□□ -1.95
DDX56Q9NY93 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
DDX56Q9NY93 ZNF72P-201ENST00000425869 1908 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 LINC02555-201ENST00000563933 1951 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DDX56Q9NY93 Y_RNA.28-201ENST00000362554 111 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 Y_RNA.80-201ENST00000362996 102 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 Y_RNA.485-201ENST00000384395 102 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.85□□□□□ -1.95
DDX56Q9NY93 Y_RNA.592-201ENST00000410274 109 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 Y_RNA.595-201ENST00000410403 105 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 AC004866.1-201ENST00000411748 78 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 MCFD2P1-201ENST00000417812 300 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 AL160004.2-201ENST00000432935 350 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX56Q9NY93 MTND4P19-201ENST00000446659 478 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 RNU1-131P-201ENST00000458943 161 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 U8.22-201ENST00000459141 133 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 RPS27AP9-201ENST00000477681 438 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.85□□□□□ -1.95
DDX56Q9NY93 SNORA74D-201ENST00000516404 141 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 RNU7-193P-201ENST00000516723 65 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 AP003072.1-201ENST00000531740 145 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 AC022080.3-201ENST00000544433 482 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX56Q9NY93 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DDX56Q9NY93 AC008873.1-201ENST00000625051 138 ntBASIC2.85□□□□□ -1.95
DDX56Q9NY93 RNA5SP387-201ENST00000364226 106 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 RNU4-42P-201ENST00000364738 142 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 AL139095.1-201ENST00000404326 391 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.84□□□□□ -1.95
DDX56Q9NY93 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.84□□□□□ -1.95
DDX56Q9NY93 AL357134.1-201ENST00000445848 426 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 AC091179.3-201ENST00000474761 144 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 RNU6-911P-201ENST00000516523 104 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.84□□□□□ -1.95
DDX56Q9NY93 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.84□□□□□ -1.95
DDX56Q9NY93 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 AC138305.3-201ENST00000624988 240 ntBASIC2.84□□□□□ -1.95
DDX56Q9NY93 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.84□□□□□ -1.95
DDX56Q9NY93 MTND5P35-201ENST00000557537 1720 ntBASIC2.84□□□□□ -1.96
DDX56Q9NY93 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.96
DDX56Q9NY93 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
DDX56Q9NY93 Z82195.2-201ENST00000612348 18351 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 RNU1-58P-201ENST00000362413 163 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 Y_RNA.39-201ENST00000362620 98 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 Y_RNA.148-201ENST00000363557 117 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 RNU1-115P-201ENST00000365329 160 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 MIR518A2-201ENST00000384966 87 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 RNA5SP213-201ENST00000391031 106 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 RNA5SP465-201ENST00000391195 109 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 SNORD23.1-201ENST00000408212 104 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 AC139712.2-201ENST00000424302 339 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 NDUFB4P10-201ENST00000452541 359 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 HMGN2P9-201ENST00000476875 229 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.83□□□□□ -1.96
DDX56Q9NY93 RNU4-77P-201ENST00000516692 156 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 SNORA31.25-201ENST00000517242 134 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 RNU6-988P-201ENST00000519081 107 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.83□□□□□ -1.96
DDX56Q9NY93 AC093732.2-201ENST00000607950 274 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.83□□□□□ -1.96
DDX56Q9NY93 AC083806.3-201ENST00000614016 455 ntBASIC2.83□□□□□ -1.96
DDX56Q9NY93 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.83□□□□□ -1.96
DDX56Q9NY93 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 240.3 ms