Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 USP9YP28-201ENST00000435142 589 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 RPL23AP63-201ENST00000498752 471 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 RNU6-720P-201ENST00000516363 108 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 MTND1P35-201ENST00000526739 508 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.44□□□□□ -2.18
SMPD3Q9NY59 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.44□□□□□ -2.18
SMPD3Q9NY59 SNORA77B-201ENST00000578179 125 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 CPDP1-201ENST00000579660 283 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 MIR3945-201ENST00000581853 98 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 AP001485.1-201ENST00000604799 199 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 AC068205.3-201ENST00000636385 468 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 AC010615.1-201ENST00000594254 1764 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.530-201ENST00000384587 101 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 MIR583-201ENST00000384846 75 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 SNORA12.2-201ENST00000391040 156 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 RNU6-332P-201ENST00000391193 108 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 OOSP1P1-201ENST00000423265 274 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 AL589823.1-201ENST00000429577 183 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 HSPE1P9-201ENST00000440046 311 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 RPS26P55-201ENST00000471178 356 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.43□□□□□ -2.18
SMPD3Q9NY59 RNU2-34P-201ENST00000516534 121 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.43□□□□□ -2.18
SMPD3Q9NY59 MRPS36P4-201ENST00000534436 298 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 AC016957.1-201ENST00000534895 309 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 EIF1P4-201ENST00000572664 335 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 AL133215.3-201ENST00000609801 448 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 RMST_3.1-201ENST00000611651 109 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 AC084768.2-201ENST00000622736 221 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 ICE2P2-201ENST00000483823 2787 ntBASIC1.43□□□□□ -2.18
SMPD3Q9NY59 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SMPD3Q9NY59 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.100-201ENST00000363141 102 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RNU6-271P-201ENST00000363858 105 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RNU6-790P-201ENST00000384479 105 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RPS26P42-201ENST00000413485 326 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 AC007098.1-201ENST00000420122 367 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RNU7-187P-201ENST00000458985 68 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RN7SL429P-201ENST00000479090 223 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RN7SL489P-201ENST00000486185 223 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RN7SL327P-201ENST00000488659 223 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.42□□□□□ -2.18
SMPD3Q9NY59 PRR13P7-201ENST00000605538 430 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 RN7SL853P-201ENST00000617250 223 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 AC005562.2-201ENST00000618264 111 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 AC024614.3-201ENST00000637860 256 ntBASIC1.42□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.3-201ENST00000362331 103 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 RNU6-562P-201ENST00000362731 107 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 RNY4P14-201ENST00000363656 96 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 RNU6-784P-201ENST00000384330 106 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.554-201ENST00000384672 102 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 MIR300-201ENST00000401138 83 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 RNU6-373P-201ENST00000411247 98 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 ZNF885P-201ENST00000420174 1098 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.41□□□□□ -2.18
SMPD3Q9NY59 MTCO3P29-201ENST00000432119 779 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 MTCO3P18-201ENST00000440206 761 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 AC010531.2-201ENST00000465012 153 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 AC099513.1-201ENST00000490423 301 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 AF186996.7-201ENST00000492781 209 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 RNU6-856P-201ENST00000516959 98 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 DEFB131C-201ENST00000528817 165 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 AC026470.2-201ENST00000561492 181 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.41□□□□□ -2.18
SMPD3Q9NY59 MIR3124-201ENST00000582636 67 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 AC016727.2-201ENST00000603988 621 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 MIR3976-201ENST00000606807 139 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 MIR8063-201ENST00000621930 81 ntBASIC1.41□□□□□ -2.18
SMPD3Q9NY59 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.41□□□□□ -2.18
SMPD3Q9NY59 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
SMPD3Q9NY59 MIR302D-201ENST00000362275 68 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 Y_RNA.151-201ENST00000363566 112 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 RNU4-12P-201ENST00000365233 139 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 RNU6-877P-201ENST00000383868 107 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 RNU6-95P-201ENST00000384697 107 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 SNORD116-4-201ENST00000384733 96 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.4□□□□□ -2.19
SMPD3Q9NY59 AL353572.1-201ENST00000442490 417 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 OR2AQ1P-201ENST00000451972 200 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 PCMTD1P1-201ENST00000455560 355 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 RNU7-66P-201ENST00000459469 62 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 RNU1-41P-201ENST00000516161 162 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 RNU1-48P-201ENST00000516400 162 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 RNU6-256P-201ENST00000516747 97 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.4□□□□□ -2.19
SMPD3Q9NY59 TPRKBP2-201ENST00000565969 475 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 AL353149.1-201ENST00000610667 244 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 AL138726.1-201ENST00000614873 333 ntBASIC1.4□□□□□ -2.19
SMPD3Q9NY59 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 253.9 ms