Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL158209.2-201ENST00000619266 216 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AC100821.1-201ENST00000523153 2479 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 SNORA63D-201ENST00000364359 132 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 SNORA69-201ENST00000383895 132 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 RNU6-38P-201ENST00000384085 107 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 MIR548B-201ENST00000385247 97 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 RNU6-780P-201ENST00000391030 104 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 USP9YP28-201ENST00000435142 589 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 HMGN2P9-201ENST00000476875 229 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 FO393415.2-201ENST00000480085 343 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 RNA5SP481-201ENST00000516814 122 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 RNU6-856P-201ENST00000516959 98 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 RRN3P3-201ENST00000549207 578 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 NBR2-204ENST00000587322 63 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 AC103591.3-201ENST00000608684 209 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 AC095038.3-201ENST00000634439 195 ntBASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KLHL28Q9NXS3 RNU6-562P-201ENST00000362731 107 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNU1-96P-201ENST00000364163 162 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNU4-75P-201ENST00000364621 146 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 SNORA18.2-201ENST00000383865 132 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 AL117342.1-201ENST00000404861 406 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 AL161935.2-201ENST00000414627 60 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 Z83846.1-201ENST00000446798 265 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 TPTE2P5-203ENST00000458118 728 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNU7-138P-201ENST00000459479 64 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNU6-261P-201ENST00000459506 102 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 AC083798.1-201ENST00000472671 131 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 AC067942.3-201ENST00000512025 362 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNA5SP401-201ENST00000515920 127 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 SNORA14.1-201ENST00000516113 141 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 RNU6-835P-201ENST00000516974 104 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 DEFB131C-201ENST00000528817 165 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 AC084364.2-201ENST00000546924 395 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 AC016256.1-201ENST00000547971 354 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 SNORA59B-202ENST00000578183 701 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 MIR3976-201ENST00000606807 139 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 AC124864.2-201ENST00000624736 186 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 OR5AK4P-201ENST00000635912 903 ntBASIC1.28□□□□□ -2.2
KLHL28Q9NXS3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
KLHL28Q9NXS3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
KLHL28Q9NXS3 RNU6-545P-201ENST00000362681 104 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 RNU4-66P-201ENST00000365199 138 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 RNU6-877P-201ENST00000383868 107 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 SNORD37.1-201ENST00000390968 65 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 MTCO3P40-201ENST00000392516 676 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 MIR1287-201ENST00000408492 90 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 DLGAP5P1-201ENST00000430307 464 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AC027119.1-201ENST00000440877 241 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 CENPUP1-201ENST00000526649 1202 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AC005668.1-201ENST00000571142 476 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AC092747.3-201ENST00000603769 301 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AL355802.3-201ENST00000607571 545 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AC064836.2-201ENST00000609491 462 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AL121757.2-201ENST00000611223 313 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 AC009541.1-201ENST00000438279 2662 ntBASIC1.27□□□□□ -2.21
KLHL28Q9NXS3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.41-201ENST00000362646 102 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 SNORD33-201ENST00000362761 85 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1042P-201ENST00000384204 107 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 MIR300-201ENST00000401138 83 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 RNU6-648P-201ENST00000410190 107 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AC016907.1-201ENST00000419483 435 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 MTCO3P29-201ENST00000432119 779 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AC069257.2-201ENST00000441819 155 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms