Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.9□□□□□ -1.95
MKS1Q9NXB0 UQCRBP2-201ENST00000447827 297 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 RPL21P10-201ENST00000463521 490 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 RPL26P26-201ENST00000480251 434 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
MKS1Q9NXB0 RNU1-117P-201ENST00000517041 158 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 RNU1-104P-201ENST00000517280 175 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 AC233702.2-202ENST00000562547 291 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 U4atac.1-201ENST00000618345 95 ntBASIC2.9□□□□□ -1.95
MKS1Q9NXB0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
MKS1Q9NXB0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
MKS1Q9NXB0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.9□□□□□ -1.95
MKS1Q9NXB0 SNORA9.2-201ENST00000365361 133 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 MIR512-1-201ENST00000384913 84 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AL079342.1-201ENST00000401460 267 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AC091153.1-201ENST00000466297 402 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AC018868.1-201ENST00000491307 315 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.89□□□□□ -1.95
MKS1Q9NXB0 ATP5EP1-201ENST00000510257 156 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 SNORA9.3-201ENST00000516383 129 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AC008269.2-201ENST00000561915 1105 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.89□□□□□ -1.95
MKS1Q9NXB0 PRR13P7-201ENST00000605538 430 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 MIR92B-201ENST00000607575 96 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AC012314.7-201ENST00000619693 93 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 AC010297.1-201ENST00000623948 149 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 MIR203B-201ENST00000636080 86 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.89□□□□□ -1.95
MKS1Q9NXB0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
MKS1Q9NXB0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MKS1Q9NXB0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.88□□□□□ -1.95
MKS1Q9NXB0 AC096644.4-201ENST00000563417 2912 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 SNORA71.3-201ENST00000362582 128 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 RNA5SP393-201ENST00000363423 117 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.183-201ENST00000363882 113 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.214-201ENST00000364201 112 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 MIR183-201ENST00000384958 110 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 RPL21P1-201ENST00000399532 476 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 ELOCP21-201ENST00000412558 336 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 ELOCP20-201ENST00000422460 345 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 MTND3P2-201ENST00000438452 342 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.88□□□□□ -1.95
MKS1Q9NXB0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.88□□□□□ -1.95
MKS1Q9NXB0 RNU6-408P-201ENST00000515910 100 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 SNORA31.15-201ENST00000516771 132 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 AP002404.1-201ENST00000532005 451 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.88□□□□□ -1.95
MKS1Q9NXB0 AL049779.4-201ENST00000604500 156 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 AC084757.4-201ENST00000616350 526 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 AC008873.1-201ENST00000625051 138 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
MKS1Q9NXB0 U6.105-201ENST00000637379 88 ntBASIC2.88□□□□□ -1.95
MKS1Q9NXB0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MKS1Q9NXB0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
MKS1Q9NXB0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.87□□□□□ -1.95
MKS1Q9NXB0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MKS1Q9NXB0 SNORA63.1-201ENST00000362493 131 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 RNU6-545P-201ENST00000362681 104 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 RNU6-961P-201ENST00000363893 105 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 SNORD87-201ENST00000364849 89 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 SNORD31B-201ENST00000364977 69 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 SNORA25B-201ENST00000365507 128 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 MIR586-201ENST00000385035 97 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 RNU6-1109P-201ENST00000391187 107 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 MIR300-201ENST00000401138 83 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.87□□□□□ -1.95
MKS1Q9NXB0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.87□□□□□ -1.95
MKS1Q9NXB0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 HMGN2P18-201ENST00000450680 270 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 RNU7-26P-201ENST00000458980 63 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 RNU6-625P-201ENST00000459412 107 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 RNU6-635P-201ENST00000516651 102 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 SNORA40.15-201ENST00000516884 107 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.87□□□□□ -1.95
MKS1Q9NXB0 AC107016.2-201ENST00000547968 190 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 AC018448.1-201ENST00000552843 316 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.87□□□□□ -1.95
MKS1Q9NXB0 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.87□□□□□ -1.95
MKS1Q9NXB0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.86□□□□□ -1.95
MKS1Q9NXB0 RNU6-743P-201ENST00000364151 106 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 AL357139.1-201ENST00000407792 426 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 AC009238.1-201ENST00000442165 424 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 AC009237.6-201ENST00000446969 424 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.86□□□□□ -1.95
MKS1Q9NXB0 RNU6-667P-201ENST00000517186 102 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.86□□□□□ -1.95
MKS1Q9NXB0 AK6P2-201ENST00000549020 471 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 AC073346.2-201ENST00000624724 2058 ntBASIC2.86□□□□□ -1.95
MKS1Q9NXB0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.143-201ENST00000363520 106 ntBASIC2.85□□□□□ -1.95
MKS1Q9NXB0 Y_RNA.176-201ENST00000363815 109 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms