Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 IPO7P1-201ENST00000442031 636 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 RNU6-625P-201ENST00000459412 107 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 AC007536.1-201ENST00000533382 349 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 MIR2682-201ENST00000580305 110 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 AC078899.3-201ENST00000599065 212 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 MIR7106-201ENST00000612419 65 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 uc_338.25-201ENST00000613756 156 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 AL357075.2-201ENST00000614906 189 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 U4.1-201ENST00000620349 87 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 AC068205.3-201ENST00000636385 468 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 U6.104-201ENST00000637979 90 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 MIR422A-201ENST00000362286 90 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 RNU6-234P-201ENST00000365229 104 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 RNU6-546P-201ENST00000383991 107 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 AC003685.2-201ENST00000422795 395 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 AC092427.1-202ENST00000430569 476 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 AL445687.1-201ENST00000439946 251 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 Z75741.1-201ENST00000446793 314 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 SNORA31.26-201ENST00000517250 137 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 AC022080.3-201ENST00000544433 482 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 RRN3P3-201ENST00000549207 578 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 AC004817.2-201ENST00000561794 651 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 MYL12BP1-201ENST00000569826 507 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 AC090616.3-201ENST00000582184 217 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 MIR3149-201ENST00000584629 83 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 MIR8062-201ENST00000621515 85 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 AC008873.1-201ENST00000625051 138 ntBASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.94□□□□□ -1.94
CCM2LQ9NUG4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 Y_RNA.143-201ENST00000363520 106 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 Y_RNA.230-201ENST00000364348 109 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 U8.9-201ENST00000365667 134 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 RNU6-1026P-201ENST00000384465 108 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 MIR181B1-201ENST00000385240 110 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 RNA5SP274-201ENST00000410484 108 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 AC005002.2-201ENST00000438228 269 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 LINC01399-202ENST00000458450 244 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 RNU6-408P-201ENST00000515910 100 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 RNU6-1098P-201ENST00000516772 96 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 RNU1-117P-201ENST00000517041 158 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 AP003733.2-201ENST00000529409 171 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 AC022616.8-201ENST00000533569 253 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 AC018448.1-201ENST00000552843 316 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 MIR4300-201ENST00000581016 96 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 MIR4503-201ENST00000582187 83 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 AL355297.2-201ENST00000604792 129 ntBASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.93□□□□□ -1.94
CCM2LQ9NUG4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 RNU6-702P-201ENST00000364982 107 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 RNA5SP126-201ENST00000365092 109 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 SNORD63-201ENST00000384262 68 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 MIR887-201ENST00000401258 79 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 AL357075.1-201ENST00000404107 726 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 RNU5A-5P-201ENST00000411054 116 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 RNU2-32P-201ENST00000411193 191 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 AL390729.2-201ENST00000416137 156 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 UBBP3-201ENST00000445497 241 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 RN7SL20P-201ENST00000488827 297 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 RN7SL633P-201ENST00000488974 297 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 RNU6-56P-201ENST00000516986 93 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 AK6P2-201ENST00000549020 471 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 AC136932.1-201ENST00000574771 208 ntBASIC2.92□□□□□ -1.94
CCM2LQ9NUG4 AC006023.1-201ENST00000603944 259 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms