Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC078809.1-201ENST00000427601 140 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 AC124916.1-201ENST00000444020 547 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 UBE2V1P7-201ENST00000446395 340 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 AC114801.2-201ENST00000503825 781 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 AC016632.1-201ENST00000503994 196 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 HMGN1P13-201ENST00000505795 138 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 HMGB3P3-201ENST00000510526 400 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 RNA5SP112-201ENST00000515937 99 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 RNU6-470P-201ENST00000515954 104 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 Y_RNA.701-201ENST00000516812 110 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 RNU6-699P-201ENST00000517081 110 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 RNU1-104P-201ENST00000517280 175 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 MIR5701-3-201ENST00000578890 82 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 AC105245.1-201ENST00000581934 244 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 MIR5701-1-201ENST00000585138 82 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 AL034555.1-201ENST00000604816 211 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 MIR5701-2-201ENST00000615634 82 ntBASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
ECHDC1Q9NTX5 RNY1P16-201ENST00000363063 111 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 RNU6-486P-201ENST00000363116 107 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 Y_RNA.216-201ENST00000364205 93 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 Y_RNA.463-201ENST00000384271 102 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 SNORA40.18-201ENST00000391200 128 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 CBX3P9-201ENST00000402326 552 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 MIR1294-201ENST00000408503 142 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AC236972.2-201ENST00000434979 310 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AC007677.1-201ENST00000445757 515 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 CHEK2P4-201ENST00000450340 246 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AC087477.1-201ENST00000465747 340 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 RPL23AP42-201ENST00000471152 471 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 RPL22P13-201ENST00000493291 347 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 CBX3P7-201ENST00000532876 502 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AL356157.2-201ENST00000605122 111 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AL080274.1-201ENST00000605565 220 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AC090574.1-201ENST00000623186 233 ntBASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC1Q9NTX5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 ZNF299P-201ENST00000406845 1804 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 RNU6-1115P-201ENST00000362490 106 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 RNU6-1040P-201ENST00000383974 107 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 Y_RNA.405-201ENST00000383979 100 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 Y_RNA.451-201ENST00000384200 100 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 U8.10-201ENST00000384260 133 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 Y_RNA.524-201ENST00000384564 100 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 Y_RNA.561-201ENST00000384694 100 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 MIR583-201ENST00000384846 75 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 U6atac.2-201ENST00000408644 118 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 RNA5SP201-201ENST00000410316 124 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 AL354751.2-201ENST00000415471 210 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 MTND1P14-201ENST00000427400 950 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 AL445305.1-201ENST00000432577 575 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 U8.22-201ENST00000459141 133 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 TOMM22P6-201ENST00000465035 409 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 AC105758.1-201ENST00000506038 399 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 SNORD14A-201ENST00000606526 91 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 MIR1244-1-201ENST00000612829 85 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 MIR1244-3-201ENST00000635744 85 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 MIR1244-2-201ENST00000636449 85 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 MIR1244-4-202ENST00000636813 85 ntBASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.2□□□□□ -2.06
ECHDC1Q9NTX5 AP000560.1-201ENST00000624150 1937 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 Y_RNA.146-201ENST00000363549 102 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 RNA5SP99-201ENST00000364020 114 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 Y_RNA.460-201ENST00000384255 102 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 RNU6-1274P-201ENST00000384557 107 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 AC012306.1-201ENST00000423267 114 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 RPL23AP50-201ENST00000434149 455 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 AC080013.2-201ENST00000460866 323 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 AC068781.1-201ENST00000488231 618 ntBASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.19□□□□□ -2.06
ECHDC1Q9NTX5 AC145146.1-201ENST00000496370 254 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms