Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC018448.1-201ENST00000552843 316 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC107294.3-201ENST00000609211 526 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC073349.3-201ENST00000617616 186 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 MIR622-201ENST00000638396 96 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC000403.1-201ENST00000613696 3585 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.101-201ENST00000363154 102 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 RNU5F-3P-201ENST00000363767 117 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 SNORA71.1-201ENST00000364523 117 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 RNU6-487P-201ENST00000365430 104 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 MIR767-201ENST00000390228 109 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 EI24P2-201ENST00000397776 1076 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 AL606753.1-201ENST00000427435 87 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 AL161651.1-201ENST00000440882 223 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 AP001324.2-201ENST00000461163 319 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 AC104027.1-201ENST00000521887 300 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 AC092628.2-201ENST00000622492 339 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 U6.106-201ENST00000636360 105 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 AC132825.6-201ENST00000638861 357 ntBASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PDLIM7Q9NR12 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 RNU4-82P-201ENST00000362443 140 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.308-201ENST00000365043 101 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.498-201ENST00000384460 102 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 AL512633.1-201ENST00000399931 655 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.597-201ENST00000410463 100 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 RN7SKP220-201ENST00000410611 288 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 AL135938.1-201ENST00000443141 297 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 AC007215.1-201ENST00000464893 276 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 AC091021.1-201ENST00000468051 388 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 AC091179.3-201ENST00000474761 144 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 AC074133.1-201ENST00000515696 183 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 RNU1-143P-201ENST00000516296 146 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 CYCSP23-201ENST00000519781 313 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 AC025281.1-201ENST00000567026 265 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 MIR4319-201ENST00000577285 85 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 MIR3145-201ENST00000580727 82 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 U1.23-201ENST00000610293 146 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 RNU1-68P-201ENST00000615382 146 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 U1.39-201ENST00000621562 146 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 AC099654.7-201ENST00000635788 2127 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 GABRG2-229ENST00000641017 3628 ntBASIC3.49□□□□□ -1.85
PDLIM7Q9NR12 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 RNU1-75P-201ENST00000347264 129 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.217-201ENST00000364214 105 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 RNU6-793P-201ENST00000384233 104 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 MIR1261-201ENST00000408659 82 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 AC024067.1-201ENST00000426199 223 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 HMGN1P18-201ENST00000457642 277 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.641-201ENST00000459414 105 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 RNU6-346P-201ENST00000516288 111 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 AC115990.1-201ENST00000526957 301 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 MRPS18CP4-201ENST00000535821 231 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 ELOCP29-201ENST00000588193 334 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 AC004467.1-201ENST00000615678 330 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 SNORD98-201ENST00000636377 67 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 BX322639.1-202ENST00000423987 2213 ntBASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM7Q9NR12 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 AC002543.1-201ENST00000299783 1954 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 RNU4-80P-201ENST00000363200 141 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 RNU6-727P-201ENST00000363592 107 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.240-201ENST00000364469 95 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 CD24P4-201ENST00000382840 243 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 RNU6-804P-201ENST00000384286 107 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 AL133475.1-201ENST00000404414 305 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 RAB28P5-201ENST00000427490 651 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 RPS15AP5-201ENST00000436276 388 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 TMSB4XP3-201ENST00000445144 114 ntBASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.47□□□□□ -1.85
PDLIM7Q9NR12 RNU6-191P-201ENST00000516295 94 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms