Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 MIR2053-201ENST00000459295 91 ntBASIC2.57□□□□□ -2
ARFGAP3Q9NP61 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.57□□□□□ -2
ARFGAP3Q9NP61 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.57□□□□□ -2
ARFGAP3Q9NP61 SUB1P3-201ENST00000564581 315 ntBASIC2.57□□□□□ -2
ARFGAP3Q9NP61 MIR5695-201ENST00000579717 85 ntBASIC2.57□□□□□ -2
ARFGAP3Q9NP61 MIR4672-201ENST00000583126 81 ntBASIC2.57□□□□□ -2
ARFGAP3Q9NP61 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.99-201ENST00000363138 105 ntBASIC2.56□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.146-201ENST00000363549 102 ntBASIC2.56□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.187-201ENST00000363918 113 ntBASIC2.56□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.332-201ENST00000365271 113 ntBASIC2.56□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.364-201ENST00000365532 101 ntBASIC2.56□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.577-201ENST00000384794 101 ntBASIC2.56□□□□□ -2
ARFGAP3Q9NP61 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 RNU6-1114P-201ENST00000516022 107 ntBASIC2.56□□□□□ -2
ARFGAP3Q9NP61 RNA5SP148-201ENST00000516527 94 ntBASIC2.56□□□□□ -2
ARFGAP3Q9NP61 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
ARFGAP3Q9NP61 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
ARFGAP3Q9NP61 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.55□□□□□ -2
ARFGAP3Q9NP61 RNU6-280P-201ENST00000364145 104 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.358-201ENST00000365491 99 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 MIR559-201ENST00000385188 96 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 RNU1-139P-201ENST00000391307 165 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 HMGN2P39-201ENST00000398005 273 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 RNU6-1156P-201ENST00000410365 100 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 AC123900.1-201ENST00000420390 96 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.55□□□□□ -2
ARFGAP3Q9NP61 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 AC016925.1-201ENST00000458303 298 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 AC105758.1-201ENST00000506038 399 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 RRN3P3-201ENST00000549207 578 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.55□□□□□ -2
ARFGAP3Q9NP61 AC009127.3-201ENST00000570531 403 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 AC090617.3-201ENST00000573670 475 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.55□□□□□ -2
ARFGAP3Q9NP61 MIR6817-201ENST00000615588 66 ntBASIC2.55□□□□□ -2
ARFGAP3Q9NP61 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.55□□□□□ -2
ARFGAP3Q9NP61 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.54□□□□□ -2
ARFGAP3Q9NP61 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ARFGAP3Q9NP61 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.61-201ENST00000362835 102 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 RNU6-490P-201ENST00000362985 107 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 MIR625-201ENST00000385047 85 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 MIR29C-201ENST00000385231 88 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.579-201ENST00000390939 94 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 RN7SKP284-201ENST00000411002 343 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.54□□□□□ -2
ARFGAP3Q9NP61 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.54□□□□□ -2
ARFGAP3Q9NP61 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.54□□□□□ -2
ARFGAP3Q9NP61 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 RNU6-344P-201ENST00000516635 111 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.54□□□□□ -2
ARFGAP3Q9NP61 AC080078.3-201ENST00000605407 463 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 AC005296.1-201ENST00000616145 209 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 AL359314.1-201ENST00000616913 261 ntBASIC2.54□□□□□ -2
ARFGAP3Q9NP61 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ARFGAP3Q9NP61 RNU5F-3P-201ENST00000363767 117 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 RNU6-1164P-201ENST00000364428 107 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 Y_RNA.557-201ENST00000384680 107 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 MIR300-201ENST00000401138 83 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 MIR1283-1-201ENST00000408494 87 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 MRPS18CP6-201ENST00000423587 223 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 AC096638.1-201ENST00000444678 216 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 AC104435.1-201ENST00000483483 166 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.53□□□□□ -2
ARFGAP3Q9NP61 RNA5SP320-201ENST00000516263 124 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 RNU1-117P-201ENST00000517041 158 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 RNU6-699P-201ENST00000517081 110 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 SNORA31.25-201ENST00000517242 134 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.53□□□□□ -2
ARFGAP3Q9NP61 MIR4753-201ENST00000585119 83 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 AL133255.1-201ENST00000606374 441 ntBASIC2.53□□□□□ -2
ARFGAP3Q9NP61 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.53□□□□□ -2
ARFGAP3Q9NP61 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ARFGAP3Q9NP61 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 MIR449A-201ENST00000362113 91 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 RNU1-62P-201ENST00000362599 164 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 RNU6-727P-201ENST00000363592 107 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 Y_RNA.419-201ENST00000384041 102 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 MIR518A2-201ENST00000384966 87 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 RNA5SP213-201ENST00000391031 106 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 AL033519.2-201ENST00000403958 392 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 SNORD23.1-201ENST00000408212 104 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 BX510359.4-201ENST00000423750 193 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 U8.22-201ENST00000459141 133 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 AC091179.3-201ENST00000474761 144 ntBASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.52□□□□□ -2.01
ARFGAP3Q9NP61 AC093023.1-201ENST00000547375 507 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms