Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 Y_RNA.7-201ENST00000362352 102 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 SNORD87-201ENST00000364849 89 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 SNORD113-1-201ENST00000365321 69 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 SNORA18.2-201ENST00000383865 132 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 AP000567.1-201ENST00000406413 156 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 AL031121.1-201ENST00000406553 254 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 RPS29P31-201ENST00000446147 164 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 AC112771.1-201ENST00000463581 102 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 RPL36AP48-201ENST00000485521 314 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 RNU1-117P-201ENST00000517041 158 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 HSPE1P18-201ENST00000517602 280 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 AC006023.1-201ENST00000603944 259 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 AC093732.2-201ENST00000607950 274 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 uc_338.14-201ENST00000613162 166 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 AC026241.1-201ENST00000517873 2142 ntBASIC3.92□□□□□ -1.78
ZFYVE28Q9HCC9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 AC069528.2-201ENST00000624849 1991 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 Y_RNA.291-201ENST00000364886 113 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 SNORA44-201ENST00000384584 132 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 RNA5SP252-201ENST00000391131 119 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 RNU7-170P-201ENST00000459303 61 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 Y_RNA.637-201ENST00000459424 114 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 SNORA31.21-201ENST00000517180 77 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 RPL12P50-201ENST00000603116 116 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 AL137790.1-201ENST00000634283 177 ntBASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.91□□□□□ -1.78
ZFYVE28Q9HCC9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
ZFYVE28Q9HCC9 Y_RNA.238-201ENST00000364441 102 ntBASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 RNU6-312P-201ENST00000364629 107 ntBASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 AC004866.1-201ENST00000411748 78 ntBASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 AL451074.5-201ENST00000415894 435 ntBASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 MIR548AI-201ENST00000579940 88 ntBASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 AC110741.2-201ENST00000605278 268 ntBASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 AC091152.2-201ENST00000591628 2569 ntBASIC3.9□□□□□ -1.79
ZFYVE28Q9HCC9 RNU1-75P-201ENST00000347264 129 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 RNU6-710P-201ENST00000410424 105 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 TOMM22P2-201ENST00000430735 237 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 HMGN2P20-201ENST00000437531 273 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 AC107083.1-201ENST00000439643 279 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 SUMO2P18-201ENST00000518873 252 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 AC136628.3-201ENST00000521868 290 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 AC079598.5-201ENST00000547460 117 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 MIR4672-201ENST00000583126 81 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 AL033523.1-201ENST00000605153 153 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 MTND1P7-201ENST00000632801 297 ntBASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ZFYVE28Q9HCC9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.121-201ENST00000363309 113 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.272-201ENST00000364696 102 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 RNU4-17P-201ENST00000365598 141 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 RNU6-763P-201ENST00000390865 106 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 Y_RNA.580-201ENST00000391004 95 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 RNU2-2P-201ENST00000410396 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 RHEBP3-201ENST00000411920 351 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 AL365496.1-201ENST00000426885 215 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 RPS20P10-201ENST00000451209 253 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 SNORA31.1-201ENST00000515993 133 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 SNORA31.5-201ENST00000516190 133 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 DEFB131C-201ENST00000528817 165 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 RNU2-4P-201ENST00000606190 192 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.15-201ENST00000611544 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.16-201ENST00000613119 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.12-201ENST00000613778 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.9-201ENST00000615427 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 AL078604.3-201ENST00000615580 211 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.11-201ENST00000616345 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.2-201ENST00000616535 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.3-201ENST00000617785 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.19-201ENST00000618602 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 RNU2-1-201ENST00000618664 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.6-201ENST00000619225 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.5-201ENST00000619465 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 U2.10-201ENST00000620268 191 ntBASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZFYVE28Q9HCC9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms