Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SNORA51.11-201ENST00000384442 131 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 RNU6-1109P-201ENST00000391187 107 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 RNA5SP492-201ENST00000411330 114 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 RPL19P1-201ENST00000411635 428 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 WARS2P1-201ENST00000429678 537 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.71□□□□□ -1.98
USP29Q9HBJ7 RPS3P1-201ENST00000456781 192 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 MRPS35P2-201ENST00000508242 191 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.71□□□□□ -1.98
USP29Q9HBJ7 AC096725.1-201ENST00000514266 313 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 AC091144.1-201ENST00000519573 138 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 AC034114.1-201ENST00000520293 285 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 AC008269.2-201ENST00000561915 1105 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 MIR3923-201ENST00000579521 83 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 MIR4635-201ENST00000583759 79 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.71□□□□□ -1.98
USP29Q9HBJ7 RAC1P9-201ENST00000604990 392 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 PRR13P7-201ENST00000605538 430 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.71□□□□□ -1.98
USP29Q9HBJ7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
USP29Q9HBJ7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 OR56A5-201ENST00000340110 738 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RNU6-281P-201ENST00000384212 103 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.458-201ENST00000384240 102 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RNU6-463P-201ENST00000384340 107 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RPL21P1-201ENST00000399532 476 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RNU6-130P-201ENST00000411112 103 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RNA5SP508-201ENST00000411327 119 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 ARL5AP4-201ENST00000430731 512 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RPEP5-201ENST00000441137 268 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 UBBP3-201ENST00000445497 241 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RNA5SP282-201ENST00000516355 108 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 AC022868.1-201ENST00000517767 391 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 COX6CP5-201ENST00000527162 228 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 AC090517.1-201ENST00000569307 266 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 AC103810.1-201ENST00000579873 453 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 RPS29P30-201ENST00000600975 111 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 MIR7157-201ENST00000635801 60 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 U6.92-201ENST00000636464 89 ntBASIC2.7□□□□□ -1.98
USP29Q9HBJ7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.47-201ENST00000362697 108 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 RNU1-76P-201ENST00000362903 159 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.210-201ENST00000364161 110 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.214-201ENST00000364201 112 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.276-201ENST00000364732 109 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 RNU6-541P-201ENST00000384709 110 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 ELOCP20-201ENST00000422460 345 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 AL513328.1-201ENST00000446460 224 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.69□□□□□ -1.98
USP29Q9HBJ7 RNA5SP112-201ENST00000515937 99 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 HSPE1P20-201ENST00000538133 289 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 AL390123.1-201ENST00000603216 237 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 AL138963.2-201ENST00000605137 226 ntBASIC2.69□□□□□ -1.98
USP29Q9HBJ7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP29Q9HBJ7 BX322639.1-202ENST00000423987 2213 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 RNU6-486P-201ENST00000363116 107 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 RNU4-56P-201ENST00000364700 142 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.68□□□□□ -1.98
USP29Q9HBJ7 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 RNU6-574P-201ENST00000384265 107 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.574-201ENST00000384766 95 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 MIR208B-201ENST00000401172 77 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 RNU2-52P-201ENST00000410680 190 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.68□□□□□ -1.98
USP29Q9HBJ7 AL445305.1-201ENST00000432577 575 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.68□□□□□ -1.98
USP29Q9HBJ7 AC067942.3-201ENST00000512025 362 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 RNU6-635P-201ENST00000516651 102 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 RNA5SP54-201ENST00000516951 92 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 MIR4503-201ENST00000582187 83 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
USP29Q9HBJ7 AL121655.1-201ENST00000605811 308 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 AC010205.1-201ENST00000616668 449 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 7SK.10-201ENST00000621414 298 ntBASIC2.68□□□□□ -1.98
USP29Q9HBJ7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 RNA5SP361-201ENST00000362686 118 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.176-201ENST00000363815 109 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 RNU6-611P-201ENST00000384276 104 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 Y_RNA.471-201ENST00000384312 102 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 MIR329-1-201ENST00000385028 80 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 MIR549A-201ENST00000385268 96 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
USP29Q9HBJ7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 RNU2-25P-201ENST00000411041 191 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 SDAD1P3-201ENST00000427380 333 ntBASIC2.67□□□□□ -1.98
USP29Q9HBJ7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms