Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-417P-201ENST00000384712 107 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.568-201ENST00000384742 113 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 SNORD17-201ENST00000390930 237 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AC126124.2-201ENST00000413542 321 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AL135790.2-201ENST00000437701 267 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AC004386.2-201ENST00000441858 148 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 RPL30P14-201ENST00000482744 348 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.797-201ENST00000515977 94 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-426P-201ENST00000516464 97 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 DEFB131C-201ENST00000528817 165 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AP000867.2-201ENST00000532468 320 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 MIR5006-201ENST00000583027 110 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AC008739.3-201ENST00000603262 127 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AC107294.3-201ENST00000609211 526 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 AF117829.1-206ENST00000621883 3802 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 AC100821.1-201ENST00000523153 2479 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 SNORA63.1-201ENST00000362493 131 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 RNU4-15P-201ENST00000362613 141 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.75-201ENST00000362927 97 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 RNU4-84P-201ENST00000364200 139 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.215-201ENST00000364204 112 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 MIR147B-201ENST00000390185 80 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-1154P-201ENST00000391001 104 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 SNORA26.5-201ENST00000391215 123 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 CYCSP48-201ENST00000417124 323 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 HMGN2P20-201ENST00000437531 273 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 RPS4XP2-201ENST00000458402 793 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 RPL23AP70-201ENST00000483361 460 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 RNA5SP380-201ENST00000517190 98 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 AC068657.1-201ENST00000520807 306 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 AC074050.1-201ENST00000563247 211 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 AC005562.2-201ENST00000618264 111 ntBASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SEC61A2Q9H9S3 MFSD8-233ENST00000641482 4860 ntBASIC3.03□□□□□ -1.93
SEC61A2Q9H9S3 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 MIR208A-201ENST00000362287 71 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 Y_RNA.23-201ENST00000362496 106 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 Y_RNA.293-201ENST00000364908 93 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-198P-201ENST00000384258 104 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-748P-201ENST00000384648 107 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 Y_RNA.572-201ENST00000384757 98 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AL031003.1-201ENST00000404229 172 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 RNA5SP201-201ENST00000410316 124 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AL714022.1-201ENST00000439897 151 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 RBMY2UP-201ENST00000453474 324 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AC010099.1-201ENST00000455434 375 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AC146507.2-201ENST00000460608 476 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 SNRPGP3-201ENST00000469405 227 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AC145146.1-201ENST00000496370 254 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-62P-201ENST00000516526 102 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AC100767.1-201ENST00000528178 123 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AC021269.2-201ENST00000532318 330 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 SNORD11B-201ENST00000607707 90 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 MIR6076-201ENST00000617521 113 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SEC61A2Q9H9S3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 SNORD114-19-201ENST00000363072 75 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 Y_RNA.121-201ENST00000363309 113 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-381P-201ENST00000391259 108 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-735P-201ENST00000410612 107 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 RNA5SP504-201ENST00000410676 117 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AIMP1P2-201ENST00000425294 312 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 CYCSP35-201ENST00000451978 304 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 PRSS3P4-201ENST00000453323 162 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AL441985.1-201ENST00000457727 251 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 FCF1P8-201ENST00000510322 597 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-313P-201ENST00000516317 112 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 HSPE1P18-201ENST00000517602 280 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms