Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC123900.1-201ENST00000420390 96 ntBASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 AL353689.1-201ENST00000438895 199 ntBASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 MIR1273D-201ENST00000577266 86 ntBASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 MIR340-201ENST00000362125 95 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 Y_RNA.184-201ENST00000363884 108 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 SNORD31B-201ENST00000364977 69 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 RNU6-418P-201ENST00000384035 107 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 RNU6-767P-201ENST00000384132 107 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 RNA5SP425-201ENST00000410336 112 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 MTCO3P46-201ENST00000425787 232 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 RNA5SP57-201ENST00000459463 123 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 RPL23AP42-201ENST00000471152 471 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 AC116337.1-201ENST00000509680 687 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 AC005668.1-201ENST00000571142 476 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 AC137590.2-201ENST00000619709 240 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 SCARNA4-201ENST00000629045 128 ntBASIC1.78□□□□□ -2.12
VIPAS39Q9H9C1 AC092881.1-201ENST00000638218 2733 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.72-201ENST00000362894 103 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 RNU4-9P-201ENST00000364951 139 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 U8.10-201ENST00000384260 133 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 MIR548K-201ENST00000408406 116 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 RNA5SP501-201ENST00000410990 112 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 EIF4EP2-201ENST00000422816 654 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 MTCO3P29-201ENST00000432119 779 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 snoU13.30-201ENST00000458951 104 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 RPL30P10-201ENST00000488148 337 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 MIR4299-201ENST00000577899 72 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 MIR3169-201ENST00000578032 83 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 TCL6_2.1-201ENST00000615162 119 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 AL590808.1-201ENST00000618696 141 ntBASIC1.77□□□□□ -2.13
VIPAS39Q9H9C1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 RNA5SP465-201ENST00000391195 109 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 RPS26P42-201ENST00000413485 326 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AC074085.1-201ENST00000413598 418 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 HMGB1P18-201ENST00000438801 619 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AC107399.1-201ENST00000451226 265 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 MTND4P17-201ENST00000470444 350 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AC103851.1-201ENST00000506833 274 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AC026782.1-201ENST00000512952 449 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 RNVU1-2-201ENST00000516326 135 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 CBX3P8-201ENST00000532412 525 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 RRN3P3-201ENST00000549207 578 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AC011494.1-201ENST00000596454 237 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 AC243960.4-201ENST00000600532 288 ntBASIC1.76□□□□□ -2.13
VIPAS39Q9H9C1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-845P-201ENST00000362578 103 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.390-201ENST00000383932 102 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 SNORA64-201ENST00000384674 134 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-541P-201ENST00000384709 110 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-997P-201ENST00000384725 107 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-174P-201ENST00000410406 106 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 AC016717.1-201ENST00000448918 286 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 AC016925.1-201ENST00000458303 298 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 SNORD5.1-201ENST00000458800 75 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 AC007215.1-201ENST00000464893 276 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 AC010531.2-201ENST00000465012 153 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.670-201ENST00000516255 105 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 RNU1-117P-201ENST00000517041 158 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 UBL5P4-201ENST00000562584 236 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 MIR5696-201ENST00000578474 85 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 CYP2C61P-201ENST00000604072 290 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 SNRPGP20-201ENST00000604477 205 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 RPL17P51-201ENST00000605218 238 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 AC018462.2-201ENST00000605375 395 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms