Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-237P-201ENST00000515985 71 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 AP005639.2-201ENST00000527592 928 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 DEFB131C-201ENST00000528817 165 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 AC087441.2-201ENST00000529141 262 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 MIR4529-201ENST00000578110 78 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 MIR4303-201ENST00000581299 66 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RNF41Q9H4P4 MIR340-201ENST00000362125 95 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 RNU6-743P-201ENST00000364151 106 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 RNU6-510P-201ENST00000391239 108 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 FGF7P8-201ENST00000402994 292 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AL356776.1-201ENST00000406574 447 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 MTND3P8-201ENST00000412909 339 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AC096920.1-201ENST00000423991 241 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.76□□□□□ -2.13
RNF41Q9H4P4 RBMX2P4-201ENST00000441256 376 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 DAP3P1-201ENST00000441522 278 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AC023790.1-201ENST00000482174 347 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AC132942.1-201ENST00000486753 483 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.76□□□□□ -2.13
RNF41Q9H4P4 RNU6-273P-201ENST00000516937 96 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.76□□□□□ -2.13
RNF41Q9H4P4 GNAI2P1-201ENST00000541815 315 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AC026271.5-201ENST00000577873 130 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AL645939.4-201ENST00000604495 135 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AC019193.3-201ENST00000609144 554 ntBASIC1.76□□□□□ -2.13
RNF41Q9H4P4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.76□□□□□ -2.13
RNF41Q9H4P4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RNF41Q9H4P4 Y_RNA.279-201ENST00000364763 95 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 Y_RNA.339-201ENST00000365325 102 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 RNU6-596P-201ENST00000365395 98 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 RNU6-968P-201ENST00000384076 107 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 RNU6-1013P-201ENST00000384180 107 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 RNU6-933P-201ENST00000384424 107 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 SNORA12.2-201ENST00000391040 156 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 MIR208B-201ENST00000401172 77 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 MTND4LP16-201ENST00000440828 295 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 AL353572.1-201ENST00000442490 417 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.75□□□□□ -2.13
RNF41Q9H4P4 MTND5P5-201ENST00000503764 376 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 RNU6-991P-201ENST00000516168 107 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.75□□□□□ -2.13
RNF41Q9H4P4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.75□□□□□ -2.13
RNF41Q9H4P4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.75□□□□□ -2.13
RNF41Q9H4P4 AC015720.1-201ENST00000565251 277 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.75□□□□□ -2.13
RNF41Q9H4P4 MIR5696-201ENST00000578474 85 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 AC124303.1-201ENST00000605703 360 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.75□□□□□ -2.13
RNF41Q9H4P4 ZNF702P-202ENST00000434269 1966 ntBASIC1.75□□□□□ -2.13
RNF41Q9H4P4 CASC19-280ENST00000642102 1351 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RNF41Q9H4P4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RNF41Q9H4P4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RNF41Q9H4P4 Y_RNA.72-201ENST00000362894 103 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 RNU1-76P-201ENST00000362903 159 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 SNORD14D-201ENST00000384390 87 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 RNU6-790P-201ENST00000384479 105 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 RNU6-306P-201ENST00000384617 107 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 MIR487A-201ENST00000385009 80 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 MIR548K-201ENST00000408406 116 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 RNU6-174P-201ENST00000410406 106 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 RNA5SP450-201ENST00000411206 102 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 AL354695.1-201ENST00000427935 228 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 MTATP6P13-201ENST00000438531 667 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 AC007215.1-201ENST00000464893 276 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 TOMM22P6-201ENST00000465035 409 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.74□□□□□ -2.13
RNF41Q9H4P4 Y_RNA.682-201ENST00000516457 100 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 POLR3GP2-201ENST00000588366 668 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 AC078899.2-201ENST00000595282 212 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 AP000654.2-201ENST00000605633 586 ntBASIC1.74□□□□□ -2.13
RNF41Q9H4P4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.74□□□□□ -2.13
RNF41Q9H4P4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
RNF41Q9H4P4 AC233981.2-201ENST00000611524 1614 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 RNU6-661P-201ENST00000362409 107 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 RNU4-13P-201ENST00000364019 141 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 SNORD114-6-201ENST00000364393 72 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 RNU6-1283P-201ENST00000365314 105 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 RNU6-842P-201ENST00000384269 107 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 MIR320A-201ENST00000385302 82 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 MT-TL1-201ENST00000386347 75 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RNF41Q9H4P4 RNA5SP494-201ENST00000410653 129 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 AC007098.1-201ENST00000420122 367 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 EIF4EP2-201ENST00000422816 654 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms