Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RNU7-116P-201ENST00000516940 62 ntBASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 RNU1-117P-201ENST00000517041 158 ntBASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 AC005086.4-201ENST00000623065 213 ntBASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 AC018692.3-201ENST00000623929 123 ntBASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP3Q9BZ76 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 U8.11-201ENST00000384699 133 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 U8.12-201ENST00000384701 133 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 MIR30B-201ENST00000384850 88 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 MIR708-201ENST00000390708 88 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 RPL23AP82-202ENST00000427528 469 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 AL161651.1-201ENST00000440882 223 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 RPL23AP7-203ENST00000449021 469 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 U8.18-201ENST00000459285 133 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 CENPBD1P1-201ENST00000464061 469 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 AC108022.1-201ENST00000493466 478 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 RN7SL812P-201ENST00000493791 279 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 RNU6-857P-201ENST00000515893 110 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 RNU1-61P-201ENST00000516107 151 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 MIR3923-201ENST00000579521 83 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 MIR3609-201ENST00000582661 80 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 MIR3922-201ENST00000585192 84 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 AC079587.1-201ENST00000603846 277 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 AL137067.1-201ENST00000615933 120 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 AC005562.2-201ENST00000618264 111 ntBASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNTNAP3Q9BZ76 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 RNU1-14P-201ENST00000362759 152 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 RNU1-20P-201ENST00000363314 162 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 RNY1P1-201ENST00000364372 112 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 MIR3065-201ENST00000390137 79 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 AL441985.1-201ENST00000457727 251 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 RN7SL807P-201ENST00000470923 297 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 RPL32P34-201ENST00000486380 400 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 AIG1P1-201ENST00000503376 148 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 RNU2-58P-201ENST00000516403 183 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 SNORD19.2-201ENST00000516978 73 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 AC027176.1-201ENST00000560204 514 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 AC007256.1-201ENST00000392253 2765 ntBASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CNTNAP3Q9BZ76 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 RNY4P6-201ENST00000363667 96 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 RNU6-497P-201ENST00000365316 104 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 RNU6-748P-201ENST00000384648 107 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 MIR548B-201ENST00000385247 97 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 RNA5SP201-201ENST00000410316 124 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 RNA5SP310-201ENST00000459084 116 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 IGKV3-31-201ENST00000523109 329 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 AC141557.1-201ENST00000540982 400 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 AC105245.1-201ENST00000581934 244 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 AC005972.2-201ENST00000604690 348 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 RNU6-91P-201ENST00000607774 107 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 FAM27D1-201ENST00000612308 341 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 PCGEM1.1-201ENST00000613431 131 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 uc_338.4-201ENST00000616635 176 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 AL159152.1-201ENST00000635019 2587 ntBASIC4.04□□□□□ -1.76
CNTNAP3Q9BZ76 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms