Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SALL3Q9BXA9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SALL3Q9BXA9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.06□□□□□ -1.92
SALL3Q9BXA9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SALL3Q9BXA9 Y_RNA.81-201ENST00000362997 102 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 Y_RNA.180-201ENST00000363867 113 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 RNU6-142P-201ENST00000384019 107 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 MIR153-2-201ENST00000385225 87 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 MIR325-201ENST00000385260 98 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 AL079342.1-201ENST00000401460 267 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 EIF1P2-201ENST00000428233 350 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 MTND5P15-201ENST00000434246 349 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.06□□□□□ -1.92
SALL3Q9BXA9 AL353705.4-201ENST00000449661 238 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 Y_RNA.638-201ENST00000459374 113 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.06□□□□□ -1.92
SALL3Q9BXA9 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 AC109329.2-201ENST00000519658 482 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.06□□□□□ -1.92
SALL3Q9BXA9 NACAP3-201ENST00000552100 481 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 MIR3133-201ENST00000583157 78 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 FTX_2.1-201ENST00000618816 94 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SALL3Q9BXA9 AC069528.2-201ENST00000624849 1991 ntBASIC3.06□□□□□ -1.92
SALL3Q9BXA9 AC091564.4-201ENST00000533934 2194 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 SNORD32A-201ENST00000364805 84 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 RNU6-198P-201ENST00000384258 104 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 RNU6-658P-201ENST00000384606 106 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 PCNPP3-201ENST00000393579 471 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 AL139156.1-201ENST00000412785 841 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 AC074117.2-201ENST00000417130 397 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 HMGN2P30-201ENST00000423237 256 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 PIGPP3-201ENST00000425307 415 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 AL445305.1-201ENST00000432577 575 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 TRBV12-1-201ENST00000479785 344 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 RPL30P1-201ENST00000488676 339 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.05□□□□□ -1.92
SALL3Q9BXA9 RAC1P5-201ENST00000512182 576 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 RNU6-928P-201ENST00000516876 104 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 AC010900.2-201ENST00000604508 210 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.05□□□□□ -1.92
SALL3Q9BXA9 AL450472.1-202ENST00000637286 180 ntBASIC3.05□□□□□ -1.92
SALL3Q9BXA9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SALL3Q9BXA9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.05□□□□□ -1.92
SALL3Q9BXA9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SALL3Q9BXA9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SALL3Q9BXA9 RNU5B-2P-201ENST00000363036 113 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 RNU6-898P-201ENST00000365627 104 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 RNU6-125P-201ENST00000384505 107 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 Y_RNA.541-201ENST00000384640 113 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 CR769767.1-201ENST00000436337 346 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 RPL23AP58-201ENST00000440453 469 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 AC007969.2-201ENST00000441891 191 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 AL138752.1-201ENST00000452964 351 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 TOMM22P6-201ENST00000465035 409 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 RNU6-496P-201ENST00000516145 99 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 RNU6-1198P-201ENST00000516904 67 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.04□□□□□ -1.92
SALL3Q9BXA9 AC130289.1-201ENST00000577321 73 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 AC073308.1-201ENST00000623696 305 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 AL161431.1-201ENST00000618966 4205 ntBASIC3.04□□□□□ -1.92
SALL3Q9BXA9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.04□□□□□ -1.92
SALL3Q9BXA9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SALL3Q9BXA9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.03□□□□□ -1.92
SALL3Q9BXA9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SALL3Q9BXA9 SNORD113-8-201ENST00000363497 74 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 Y_RNA.150-201ENST00000363562 102 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 RNA5SP68-201ENST00000363885 119 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 RNU6-280P-201ENST00000364145 104 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 RNU6-746P-201ENST00000384112 109 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 SNORA29-201ENST00000384183 140 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.03□□□□□ -1.92
SALL3Q9BXA9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.03□□□□□ -1.92
SALL3Q9BXA9 RNU6-1114P-201ENST00000516022 107 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 AC027176.1-201ENST00000560204 514 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.03□□□□□ -1.92
SALL3Q9BXA9 MIR5571-201ENST00000577998 113 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 AC004792.1-201ENST00000614523 137 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 MIR7843-201ENST00000622274 79 ntBASIC3.03□□□□□ -1.92
SALL3Q9BXA9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.03□□□□□ -1.92
SALL3Q9BXA9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.03□□□□□ -1.92
SALL3Q9BXA9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.02□□□□□ -1.93
SALL3Q9BXA9 RNU4-90P-201ENST00000362773 141 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 RNU6-1266P-201ENST00000362794 105 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.200-201ENST00000364018 102 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 RNU6-318P-201ENST00000384283 103 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 SNORA67.4-201ENST00000384688 142 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 MIR32-201ENST00000384965 70 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 RNU5A-5P-201ENST00000411054 116 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 AC078809.1-201ENST00000427601 140 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 RPS15AP7-201ENST00000439294 405 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 RPS12P2-201ENST00000439728 269 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.02□□□□□ -1.93
SALL3Q9BXA9 AP000705.1-201ENST00000454567 350 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 AL139109.1-201ENST00000455491 297 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 PRELID3BP1-201ENST00000457142 540 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 AC087477.1-201ENST00000465747 340 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms