Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 SCARNA16.2-201ENST00000516520 172 ntBASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 MIR3162-201ENST00000581818 82 ntBASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 AC010928.2-201ENST00000588017 287 ntBASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 AC005014.2-201ENST00000607795 599 ntBASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 MTND4LP32-201ENST00000636111 270 ntBASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC28BQ9BUN5 MTND5P10-201ENST00000603719 1809 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNY1P16-201ENST00000363063 111 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 SNORD115-8-201ENST00000363856 82 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 Y_RNA.187-201ENST00000363918 113 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-944P-201ENST00000364023 107 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 SNORD115-38-201ENST00000365037 82 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 Y_RNA.315-201ENST00000365117 102 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-546P-201ENST00000383991 107 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-17P-201ENST00000384245 107 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-18P-201ENST00000384527 107 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-331P-201ENST00000384724 107 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 MIR153-2-201ENST00000385225 87 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 SNORA12.2-201ENST00000391040 156 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-700P-201ENST00000391043 107 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 MTCYBP10-201ENST00000424905 650 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 MTND4P28-201ENST00000426217 387 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 MTND3P23-201ENST00000431980 347 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RPL30P15-201ENST00000457129 321 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RPL17P19-201ENST00000489069 552 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNA5SP54-201ENST00000516951 92 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-1213P-201ENST00000517075 94 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 SUB1P3-201ENST00000564581 315 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 CYP2C61P-201ENST00000604072 290 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 AC100812.1-201ENST00000607622 580 ntBASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC28BQ9BUN5 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 Y_RNA.58-201ENST00000362807 102 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 Y_RNA.154-201ENST00000363624 102 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 RNY3P1-201ENST00000365085 102 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 RNY3-201ENST00000365484 102 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 U8.10-201ENST00000384260 133 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-1093P-201ENST00000391194 107 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AL512604.1-201ENST00000404812 257 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 MIR1294-201ENST00000408503 142 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AF228730.4-201ENST00000421457 183 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 RPL23AP50-201ENST00000434149 455 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 Z82188.1-201ENST00000436709 154 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 MTCO3P10-201ENST00000455912 772 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 snoU13.6-201ENST00000458785 104 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 RNU6-264P-201ENST00000517134 104 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 CBX3P7-201ENST00000532876 502 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AC022616.8-201ENST00000533569 253 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AC026470.2-201ENST00000561492 181 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 MIR4287-201ENST00000579398 78 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AC084781.2-201ENST00000615568 161 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
CCDC28BQ9BUN5 AC073544.1-201ENST00000600110 1595 ntBASIC1.84□□□□□ -2.12
CCDC28BQ9BUN5 AC008555.8-201ENST00000623602 2168 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.48-201ENST00000362710 103 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 RNU1-23P-201ENST00000363361 144 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.146-201ENST00000363549 102 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-890P-201ENST00000384121 107 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 MIR32-201ENST00000384965 70 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 MIR320B2-201ENST00000408479 138 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 RNU2-32P-201ENST00000411193 191 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 AL356320.1-201ENST00000429616 163 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 AC009238.1-201ENST00000442165 424 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 AC009237.6-201ENST00000446969 424 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-470P-201ENST00000515954 104 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 MIR4529-201ENST00000578110 78 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 AL133255.1-201ENST00000606374 441 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 AL136360.1-201ENST00000503377 1900 ntBASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC28BQ9BUN5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 AP006437.1-201ENST00000641440 3685 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 BX322639.1-202ENST00000423987 2213 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-490P-201ENST00000362985 107 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 RNU5F-3P-201ENST00000363767 117 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-1040P-201ENST00000383974 107 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.405-201ENST00000383979 100 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 RNU6-26P-201ENST00000383985 107 ntBASIC1.82□□□□□ -2.12
CCDC28BQ9BUN5 Y_RNA.451-201ENST00000384200 100 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms