Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.15□□□□□ -2.07
SDF4Q9BRK5 RNU6-566P-201ENST00000516790 107 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 RNA5SP454-201ENST00000517231 127 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AF235103.2-201ENST00000525753 346 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AC022254.1-201ENST00000567857 235 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AC011494.1-201ENST00000596454 237 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 SNRPGP20-201ENST00000604477 205 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AC093913.1-201ENST00000614178 329 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 BX322639.1-202ENST00000423987 2213 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 SNORD115-32-201ENST00000364079 82 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 RNU4-9P-201ENST00000364951 139 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 MIR764-201ENST00000390811 85 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 SNORA26.9-201ENST00000391322 122 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 AL033519.2-201ENST00000403958 392 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 AC009310.1-201ENST00000414414 451 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SDF4Q9BRK5 KPNA2P1-201ENST00000458289 1591 ntBASIC2.14□□□□□ -2.07
SDF4Q9BRK5 MTND4P5-201ENST00000435821 1374 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 Y_RNA.132-201ENST00000363421 102 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 SNORD115-8-201ENST00000363856 82 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 SNORD115-38-201ENST00000365037 82 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 RNU6-510P-201ENST00000391239 108 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 Z82205.1-201ENST00000428456 297 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AC004386.2-201ENST00000441858 148 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AC009237.7-201ENST00000447357 229 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AC010531.2-201ENST00000465012 153 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 RNU6-548P-201ENST00000517083 115 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AC015712.3-201ENST00000559380 164 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 SNORA59B-202ENST00000578183 701 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 MIR5696-201ENST00000578474 85 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 MIR5006-201ENST00000583027 110 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 AC022513.1-201ENST00000624512 117 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 MTND5P9-201ENST00000503854 1755 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.13□□□□□ -2.07
SDF4Q9BRK5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SDF4Q9BRK5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SDF4Q9BRK5 RNU6-545P-201ENST00000362681 104 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 SNORA16.1-201ENST00000364597 132 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.12□□□□□ -2.07
SDF4Q9BRK5 MIR320B2-201ENST00000408479 138 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 MIR1283-1-201ENST00000408494 87 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SDF4Q9BRK5 AC007677.1-201ENST00000445757 515 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 RNU6-329P-201ENST00000459618 107 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 RNU4-49P-201ENST00000516080 140 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 RNVU1-2-201ENST00000516326 135 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 RNU2-34P-201ENST00000516534 121 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 RNA5SP54-201ENST00000516951 92 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.12□□□□□ -2.07
SDF4Q9BRK5 MIR4713-201ENST00000582691 75 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 AC005296.1-201ENST00000616145 209 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 AC009248.2-201ENST00000619826 254 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 AC091932.3-201ENST00000624223 323 ntBASIC2.12□□□□□ -2.07
SDF4Q9BRK5 CENPCP1-201ENST00000533085 2578 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.11□□□□□ -2.07
SDF4Q9BRK5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.11□□□□□ -2.07
SDF4Q9BRK5 Y_RNA.505-201ENST00000384489 102 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SDF4Q9BRK5 MTCO3P8-201ENST00000453691 755 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 AC067942.3-201ENST00000512025 362 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 RNU6-1198P-201ENST00000516904 67 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 RNU6-273P-201ENST00000516937 96 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.11□□□□□ -2.07
SDF4Q9BRK5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.11□□□□□ -2.07
SDF4Q9BRK5 SUB1P4-201ENST00000566062 339 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.11□□□□□ -2.07
SDF4Q9BRK5 AC010928.2-201ENST00000588017 287 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 AC010900.2-201ENST00000604508 210 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 BNIP3P10-201ENST00000605360 577 ntBASIC2.11□□□□□ -2.07
SDF4Q9BRK5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
SDF4Q9BRK5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SDF4Q9BRK5 Y_RNA.86-201ENST00000363020 111 ntBASIC2.1□□□□□ -2.07
SDF4Q9BRK5 RNU6-137P-201ENST00000363680 108 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms