Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-338P-201ENST00000383888 105 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 Y_RNA.402-201ENST00000383972 102 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 Y_RNA.450-201ENST00000384198 113 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 SNORA12-201ENST00000391162 147 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 MTCYBP2-201ENST00000407745 171 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 RNA5SP201-201ENST00000410316 124 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 RNU6-174P-201ENST00000410406 106 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 Y_RNA.615-201ENST00000410769 117 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.34□□□□□ -2.19
FOXC2Q99958 MRPS10P2-201ENST00000431226 381 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AC244670.1-201ENST00000436879 112 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AL359672.1-201ENST00000442302 409 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AC008628.2-201ENST00000502605 298 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AK3P2-201ENST00000507976 429 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 MIR449C-201ENST00000516047 92 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 RNU6-314P-201ENST00000516574 104 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AC109635.3-201ENST00000529536 185 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 SCOCP1-201ENST00000554676 349 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AC104581.2-201ENST00000572227 430 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.34□□□□□ -2.19
FOXC2Q99958 AC068944.2-201ENST00000610373 403 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 MIR8074-201ENST00000615081 81 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 U4.5-201ENST00000617137 123 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AL353770.2-201ENST00000620024 78 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 AC024614.3-201ENST00000637860 256 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
FOXC2Q99958 SNORD37.1-201ENST00000390968 65 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
FOXC2Q99958 AC123900.1-201ENST00000420390 96 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.33□□□□□ -2.2
FOXC2Q99958 RNU6-1037P-201ENST00000459571 107 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 AC007547.1-201ENST00000462177 490 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.33□□□□□ -2.2
FOXC2Q99958 AC010409.1-201ENST00000487382 476 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 AC083904.1-201ENST00000487828 231 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 AC005741.1-201ENST00000511094 432 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 SNORA31.16-201ENST00000516773 139 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 AC015720.1-201ENST00000565251 277 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 CTHRC1P1-201ENST00000605383 469 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 AC005520.5-201ENST00000613926 164 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 AC091895.1-201ENST00000624494 256 ntBASIC1.33□□□□□ -2.2
FOXC2Q99958 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
FOXC2Q99958 AC092268.1-201ENST00000342691 405 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
FOXC2Q99958 Y_RNA.9-201ENST00000362354 101 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
FOXC2Q99958 MTCO3P46-201ENST00000425787 232 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.32□□□□□ -2.2
FOXC2Q99958 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.32□□□□□ -2.2
FOXC2Q99958 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.32□□□□□ -2.2
FOXC2Q99958 AC011352.1-201ENST00000512300 793 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 RPL39P5-202ENST00000512505 151 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 SNORA19.2-201ENST00000516013 114 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 RNU6-323P-201ENST00000521915 107 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 AC025423.5-201ENST00000550230 219 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.32□□□□□ -2.2
FOXC2Q99958 AC010928.2-201ENST00000588017 287 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 AC078795.3-201ENST00000602913 472 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 AC107304.1-201ENST00000604229 296 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 AC022709.1-201ENST00000615967 87 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 AC022513.1-201ENST00000624512 117 ntBASIC1.32□□□□□ -2.2
FOXC2Q99958 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.32□□□□□ -2.2
FOXC2Q99958 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.31□□□□□ -2.2
FOXC2Q99958 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
FOXC2Q99958 Y_RNA.89-201ENST00000363031 102 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 Y_RNA.135-201ENST00000363439 95 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 SNORD113-7-201ENST00000363762 77 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 RNU4-56P-201ENST00000364700 142 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 RNU6-534P-201ENST00000364877 106 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 RNU6-1215P-201ENST00000384441 102 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
FOXC2Q99958 RNU6-332P-201ENST00000391193 108 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 RN7SKP101-201ENST00000411376 320 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AL590135.1-201ENST00000422215 156 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AC019205.3-201ENST00000424573 156 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.31□□□□□ -2.2
FOXC2Q99958 USP9YP28-201ENST00000435142 589 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 MTND1P34-201ENST00000438556 671 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 MTCO1P44-201ENST00000441935 243 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AC016700.2-201ENST00000446011 156 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.31□□□□□ -2.2
FOXC2Q99958 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.31□□□□□ -2.2
FOXC2Q99958 AMD1P1-201ENST00000457220 922 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 RNU1-98P-201ENST00000458992 160 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AC130509.1-201ENST00000464158 433 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.31□□□□□ -2.2
FOXC2Q99958 AC015911.1-201ENST00000495111 156 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AC025465.4-201ENST00000513422 638 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 RNU6-970P-201ENST00000516312 107 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 RNU6-612P-201ENST00000516909 102 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 SNORA31.17-201ENST00000516953 127 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.31□□□□□ -2.2
FOXC2Q99958 AC016256.1-201ENST00000547971 354 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 HSPE1P4-201ENST00000550617 308 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 MIR3923-201ENST00000579521 83 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AL357078.3-201ENST00000607528 618 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 PCGEM1.1-201ENST00000613431 131 ntBASIC1.31□□□□□ -2.2
FOXC2Q99958 AL138726.1-201ENST00000614873 333 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms