Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.37□□□□□ -2.19
CDX2Q99626 CASC19-280ENST00000642102 1351 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 MIR126-201ENST00000362291 85 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 RNU4-15P-201ENST00000362613 141 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 Y_RNA.70-201ENST00000362886 110 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 RNU6-1120P-201ENST00000362988 108 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 Y_RNA.115-201ENST00000363272 98 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 RNU1-133P-201ENST00000364867 167 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 RNU6-336P-201ENST00000364891 107 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.36□□□□□ -2.19
CDX2Q99626 RNU6-203P-201ENST00000384038 104 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CDX2Q99626 SNORA26.3-201ENST00000391119 136 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 RNU6-332P-201ENST00000391193 108 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.36□□□□□ -2.19
CDX2Q99626 MTND4LP11-201ENST00000422184 280 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 EIF4EP2-201ENST00000422816 654 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AL353572.1-201ENST00000442490 417 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.36□□□□□ -2.19
CDX2Q99626 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.36□□□□□ -2.19
CDX2Q99626 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.36□□□□□ -2.19
CDX2Q99626 RNU1-98P-201ENST00000458992 160 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AC083798.1-201ENST00000472671 131 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AC096745.1-201ENST00000509945 370 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AC008834.1-201ENST00000511612 175 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.36□□□□□ -2.19
CDX2Q99626 LRRC34P2-201ENST00000514850 553 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 RNA5SP476-201ENST00000516613 103 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.36□□□□□ -2.19
CDX2Q99626 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.36□□□□□ -2.19
CDX2Q99626 BNIP3P25-201ENST00000596023 559 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AC104458.1-201ENST00000608243 463 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.36□□□□□ -2.19
CDX2Q99626 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 U4.5-201ENST00000617137 123 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.36□□□□□ -2.19
CDX2Q99626 AC097372.5-201ENST00000623665 376 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AC090617.10-201ENST00000624308 134 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.36□□□□□ -2.19
CDX2Q99626 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.36□□□□□ -2.19
CDX2Q99626 U6.114-201ENST00000636407 96 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 MIR3662-201ENST00000637030 95 ntBASIC1.36□□□□□ -2.19
CDX2Q99626 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDX2Q99626 Y_RNA.9-201ENST00000362354 101 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-552P-201ENST00000362869 119 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 Y_RNA.86-201ENST00000363020 111 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNY3P3-201ENST00000363816 102 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 SNORD32A-201ENST00000364805 84 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 Y_RNA.378-201ENST00000365652 113 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-25P-201ENST00000383873 107 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 Y_RNA.399-201ENST00000383955 105 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-38P-201ENST00000384085 107 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-48P-201ENST00000384161 107 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-16P-201ENST00000384385 107 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-15P-201ENST00000384534 107 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-29P-201ENST00000384637 107 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 MT-TL1-201ENST00000386347 75 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNA5SP212-201ENST00000391223 107 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 MIR934-201ENST00000401241 83 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 Y_RNA.597-201ENST00000410463 100 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC009310.1-201ENST00000414414 451 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC138393.2-201ENST00000414742 246 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RPL23AP95-201ENST00000426806 265 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.35□□□□□ -2.19
CDX2Q99626 SNAP23P1-201ENST00000433229 246 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.35□□□□□ -2.19
CDX2Q99626 MTND3P16-201ENST00000452205 344 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AL356010.1-201ENST00000456364 102 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-333P-201ENST00000459117 107 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RNU7-180P-201ENST00000459240 63 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AL163973.1-201ENST00000484753 577 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 RPS23P4-201ENST00000487908 423 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.35□□□□□ -2.19
CDX2Q99626 RNU6-965P-201ENST00000516721 96 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC109635.3-201ENST00000529536 185 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.35□□□□□ -2.19
CDX2Q99626 SCOCP1-201ENST00000554676 349 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 MIR4424-201ENST00000585257 86 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC010928.2-201ENST00000588017 287 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.35□□□□□ -2.19
CDX2Q99626 RBM11P1-201ENST00000604951 799 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC009994.1-201ENST00000606889 253 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC103810.8-201ENST00000607347 118 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 FER-210ENST00000628534 558 ntTSL 5 BASIC1.35□□□□□ -2.19
CDX2Q99626 AP000648.3-201ENST00000623539 4507 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.35□□□□□ -2.19
CDX2Q99626 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CDX2Q99626 RNU1-58P-201ENST00000362413 163 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 RNU6-1252P-201ENST00000363054 104 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 Y_RNA.99-201ENST00000363138 105 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 RNU6-522P-201ENST00000364497 107 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 Y_RNA.255-201ENST00000364581 97 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 RNU6-867P-201ENST00000364956 107 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 RNU6-996P-201ENST00000365438 107 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 RNU6-393P-201ENST00000384475 107 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 RNU6-692P-201ENST00000384496 107 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 MIR544A-201ENST00000384855 91 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 RNU6-876P-201ENST00000391295 104 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CDX2Q99626 AL591043.1-201ENST00000432461 424 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms