Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC116312.1-201ENST00000606841 314 ntBASIC1.83□□□□□ -2.12
RAB3IPQ96QF0 AL590808.1-201ENST00000618696 141 ntBASIC1.83□□□□□ -2.12
RAB3IPQ96QF0 AL359697.1-201ENST00000624879 587 ntBASIC1.83□□□□□ -2.12
RAB3IPQ96QF0 AC073869.6-201ENST00000640656 341 ntBASIC1.83□□□□□ -2.12
RAB3IPQ96QF0 BX322639.1-202ENST00000423987 2213 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 Y_RNA.6-201ENST00000362350 114 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 RNU6-1013P-201ENST00000384180 107 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 AL033519.2-201ENST00000403958 392 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 RNA5SP508-201ENST00000411327 119 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 RPS20P15-201ENST00000412792 311 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 MTATP6P13-201ENST00000438531 667 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 MTND1P34-201ENST00000438556 671 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 AC114982.1-201ENST00000469402 321 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 HMGN2P9-201ENST00000476875 229 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 RNU6-948P-201ENST00000516374 107 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 RNA5SP384-201ENST00000516615 116 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 RNU1-117P-201ENST00000517041 158 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 AP003465.2-201ENST00000602571 373 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 AC069114.2-201ENST00000604699 304 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 MIR6873-201ENST00000622788 63 ntBASIC1.82□□□□□ -2.12
RAB3IPQ96QF0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 RNU6-975P-201ENST00000384296 105 ntBASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 AC011406.1-201ENST00000512440 370 ntBASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 MIR1273D-201ENST00000577266 86 ntBASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 MIR4273-201ENST00000582824 84 ntBASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 AC064859.1-201ENST00000624741 174 ntBASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RAB3IPQ96QF0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 RNU6-296P-201ENST00000384608 107 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 RPL23AP63-201ENST00000498752 471 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 AC011352.1-201ENST00000512300 793 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 RNU4-49P-201ENST00000516080 140 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 RNU2-34P-201ENST00000516534 121 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 RNA5SP454-201ENST00000517231 127 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 AC126177.8-201ENST00000618339 1015 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 AC006001.4-201ENST00000622243 395 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 AC139792.2-201ENST00000624218 587 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 AC068205.3-201ENST00000636385 468 ntBASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.8□□□□□ -2.12
RAB3IPQ96QF0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 MIR424-201ENST00000362227 98 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNU6-661P-201ENST00000362409 107 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 Y_RNA.319-201ENST00000365138 92 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNU6-1235P-201ENST00000384559 107 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 MIR153-2-201ENST00000385225 87 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 SNORA3.2-201ENST00000408221 125 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNA5SP425-201ENST00000410336 112 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNU2-7P-201ENST00000410794 178 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 Z98742.3-201ENST00000418637 326 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RPL30P16-201ENST00000419341 429 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNU6-498P-201ENST00000459468 107 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNU7-57P-201ENST00000459540 60 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RPL30P10-201ENST00000488148 337 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 AC008549.1-201ENST00000512900 643 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNU6-566P-201ENST00000516790 107 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNA5SP54-201ENST00000516951 92 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 RNU6-58P-201ENST00000517143 103 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 MIR6128-201ENST00000615528 109 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 AL078596.1-201ENST00000624856 447 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 AC027514.1-201ENST00000588561 1603 ntBASIC1.79□□□□□ -2.12
RAB3IPQ96QF0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RAB3IPQ96QF0 AC010615.1-201ENST00000594254 1764 ntBASIC1.78□□□□□ -2.12
RAB3IPQ96QF0 RNU6-1059P-201ENST00000363752 98 ntBASIC1.78□□□□□ -2.12
RAB3IPQ96QF0 SNORD115-32-201ENST00000364079 82 ntBASIC1.78□□□□□ -2.12
RAB3IPQ96QF0 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
RAB3IPQ96QF0 RNU6-541P-201ENST00000384709 110 ntBASIC1.78□□□□□ -2.12
RAB3IPQ96QF0 MIR520A-201ENST00000384862 85 ntBASIC1.78□□□□□ -2.12
RAB3IPQ96QF0 MIR586-201ENST00000385035 97 ntBASIC1.78□□□□□ -2.12
RAB3IPQ96QF0 AL117342.1-201ENST00000404861 406 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms