Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU4-20P-201ENST00000365601 151 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 RNU6-1286P-201ENST00000383871 107 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 RNU6-38P-201ENST00000384085 107 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 MIR549A-201ENST00000385268 96 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 SNORD37.1-201ENST00000390968 65 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 RNU4-55P-201ENST00000410731 137 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AC092473.1-201ENST00000441098 221 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AC004386.2-201ENST00000441858 148 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AC016717.1-201ENST00000448918 286 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 RNA5SP481-201ENST00000516814 122 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 MRPS36P4-201ENST00000534436 298 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 SCOCP1-201ENST00000554676 349 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 MIR5692C1-201ENST00000585309 91 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AP003465.2-201ENST00000602571 373 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AL359821.1-201ENST00000605519 182 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AL357078.3-201ENST00000607528 618 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AC009509.4-201ENST00000619202 509 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 AC078883.4-201ENST00000623218 367 ntBASIC1.31□□□□□ -2.2
RPRD1AQ96P16 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
RPRD1AQ96P16 Y_RNA.123-201ENST00000363338 102 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 Y_RNA.327-201ENST00000365201 102 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 Y_RNA.359-201ENST00000365498 102 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 RNA5SP494-201ENST00000410653 129 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 RPS26P42-201ENST00000413485 326 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 CST2P1-201ENST00000425770 87 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 MTCO3P29-201ENST00000432119 779 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 FTH1P12-201ENST00000432137 551 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 MTND1P26-201ENST00000440488 538 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 AC027119.1-201ENST00000440877 241 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 TPT1P7-201ENST00000458300 517 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 U8.21-201ENST00000459536 136 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 RNA5SP401-201ENST00000515920 127 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 RNU2-34P-201ENST00000516534 121 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 AC019176.1-201ENST00000518519 225 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 AC005668.1-201ENST00000571142 476 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 MIR5006-201ENST00000583027 110 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 MIR4753-201ENST00000585119 83 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 RMST_3.1-201ENST00000611651 109 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 FER-210ENST00000628534 558 ntTSL 5 BASIC1.3□□□□□ -2.2
RPRD1AQ96P16 MIR338-201ENST00000636369 67 ntBASIC1.3□□□□□ -2.2
RPRD1AQ96P16 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.3□□□□□ -2.2
RPRD1AQ96P16 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RPRD1AQ96P16 SNORA33-201ENST00000363664 130 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 RNU4-66P-201ENST00000365199 138 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
RPRD1AQ96P16 TIMM9P3-201ENST00000428659 274 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AF186996.7-201ENST00000492781 209 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AC010424.1-201ENST00000506336 297 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.29□□□□□ -2.2
RPRD1AQ96P16 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.29□□□□□ -2.2
RPRD1AQ96P16 MTND3P12-201ENST00000559068 328 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AC026470.2-201ENST00000561492 181 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AC015688.6-201ENST00000577737 104 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AP001330.5-201ENST00000607176 411 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AC017083.3-201ENST00000609955 700 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 TCL6_2.1-201ENST00000615162 119 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 AC139792.3-201ENST00000623525 224 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.29□□□□□ -2.2
RPRD1AQ96P16 ELL2P3-201ENST00000457883 1602 ntBASIC1.29□□□□□ -2.2
RPRD1AQ96P16 SNORD33-201ENST00000362761 85 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 RNU6-331P-201ENST00000384724 107 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 RNY3P9-201ENST00000384727 106 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 Y_RNA.582-201ENST00000391023 95 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 RNU6-321P-201ENST00000410912 106 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 CDK8P2-201ENST00000415020 547 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AL135790.2-201ENST00000437701 267 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AL359672.1-201ENST00000442302 409 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 MTCO3P8-201ENST00000453691 755 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AC083798.1-201ENST00000472671 131 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AC079140.2-201ENST00000506193 142 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.28□□□□□ -2.2
RPRD1AQ96P16 SNORA19.2-201ENST00000516013 114 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.28□□□□□ -2.2
RPRD1AQ96P16 RAB11AP2-201ENST00000545905 639 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AL157687.1-201ENST00000554853 619 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AC006362.1-201ENST00000567392 174 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AC104458.1-201ENST00000608243 463 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 AC092807.2-201ENST00000609367 243 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 MIR3974-201ENST00000637126 96 ntBASIC1.28□□□□□ -2.2
RPRD1AQ96P16 Y_RNA.167-201ENST00000363735 109 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 SNORA4.2-201ENST00000365313 147 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 RNU6-968P-201ENST00000384076 107 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 RNU6-975P-201ENST00000384296 105 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 RNU6-1235P-201ENST00000384559 107 ntBASIC1.27□□□□□ -2.21
RPRD1AQ96P16 MIR194-1-201ENST00000384892 85 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms