Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 PRR13P7-201ENST00000605538 430 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 AC009994.1-201ENST00000606889 253 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 AC005520.5-201ENST00000613926 164 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 ICE2P2-201ENST00000483823 2787 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 RNU1-76P-201ENST00000362903 159 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 RNU6-877P-201ENST00000383868 107 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 RNU6-418P-201ENST00000384035 107 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 RNU6-517P-201ENST00000384362 110 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 RNY1P4-201ENST00000384595 115 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 MIR625-201ENST00000385047 85 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.26□□□□□ -2.21
USP47Q96K76 ARL5AP1-201ENST00000418991 388 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.26□□□□□ -2.21
USP47Q96K76 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.26□□□□□ -2.21
USP47Q96K76 AC245047.4-201ENST00000433189 144 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 MTND4P32-201ENST00000437189 1237 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 RPS26P55-201ENST00000471178 356 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 RNU6-405P-201ENST00000516637 110 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 RNU6-902P-201ENST00000517212 91 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 RNA5SP437-201ENST00000517249 129 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 HIF1AP1-201ENST00000553642 175 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 AC069114.2-201ENST00000604699 304 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 AL020996.3-201ENST00000606617 222 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 AC009541.1-201ENST00000438279 2662 ntBASIC1.26□□□□□ -2.21
USP47Q96K76 Y_RNA.159-201ENST00000363674 87 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 RNU1-96P-201ENST00000364163 162 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 RNU6-1019P-201ENST00000364424 107 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 MIR216A-201ENST00000385063 110 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 MIR548B-201ENST00000385247 97 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 SNORD73A-201ENST00000386062 65 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 RNU6-1106P-201ENST00000390845 107 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 RPL30P13-201ENST00000418873 348 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 AL135790.2-201ENST00000437701 267 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 MTCO2P3-201ENST00000442543 421 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 HMGN2P9-201ENST00000476875 229 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 AC091435.1-201ENST00000505442 584 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 RPL39P5-202ENST00000512505 151 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 RNU6-323P-201ENST00000521915 107 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.25□□□□□ -2.21
USP47Q96K76 LRRC34P1-201ENST00000542742 915 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 AC068790.2-201ENST00000602601 557 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 MIR3976-201ENST00000606807 139 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 AL136221.1-201ENST00000621449 509 ntBASIC1.25□□□□□ -2.21
USP47Q96K76 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
USP47Q96K76 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
USP47Q96K76 MTCO1P21-201ENST00000416634 589 ntBASIC1.24□□□□□ -2.21
USP47Q96K76 USP9YP28-201ENST00000435142 589 ntBASIC1.24□□□□□ -2.21
USP47Q96K76 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.24□□□□□ -2.21
USP47Q96K76 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.24□□□□□ -2.21
USP47Q96K76 AC099513.1-201ENST00000490423 301 ntBASIC1.24□□□□□ -2.21
USP47Q96K76 RNU6-430P-201ENST00000517078 107 ntBASIC1.24□□□□□ -2.21
USP47Q96K76 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.24□□□□□ -2.21
USP47Q96K76 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.24□□□□□ -2.21
USP47Q96K76 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
USP47Q96K76 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USP47Q96K76 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP47Q96K76 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP47Q96K76 AC090960.1-201ENST00000421072 306 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 FTH1P12-201ENST00000432137 551 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.23□□□□□ -2.21
USP47Q96K76 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.23□□□□□ -2.21
USP47Q96K76 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.23□□□□□ -2.21
USP47Q96K76 RNU7-180P-201ENST00000459240 63 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 AC079140.2-201ENST00000506193 142 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 SNORD60.2-201ENST00000516883 86 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 MTCO2P4-201ENST00000517968 247 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 MTND4P7-201ENST00000523876 130 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.23□□□□□ -2.21
USP47Q96K76 MIR4698-201ENST00000577795 80 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 AP001596.2-201ENST00000608410 312 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 AL354950.2-201ENST00000617939 290 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 AC023510.2-201ENST00000622162 746 ntBASIC1.23□□□□□ -2.21
USP47Q96K76 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP47Q96K76 MIR302D-201ENST00000362275 68 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 RNU6-996P-201ENST00000365438 107 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 AC060773.1-201ENST00000421698 310 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.22□□□□□ -2.21
USP47Q96K76 AC005534.2-201ENST00000431047 433 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 snoU13.6-201ENST00000458785 104 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 RNU7-63P-201ENST00000459054 62 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 RNU6-1037P-201ENST00000459571 107 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 AC108078.1-201ENST00000508073 725 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.22□□□□□ -2.21
USP47Q96K76 MIR4528-201ENST00000577763 90 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 CTHRC1P1-201ENST00000605383 469 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 uc_338.34-201ENST00000617467 174 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 AC126177.8-201ENST00000618339 1015 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 AL121890.5-201ENST00000620848 304 ntBASIC1.22□□□□□ -2.21
USP47Q96K76 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
USP47Q96K76 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
USP47Q96K76 RNU6-562P-201ENST00000362731 107 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 RNA5SP219-201ENST00000390940 113 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 RN7SKP142-201ENST00000411236 328 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.21□□□□□ -2.21
USP47Q96K76 RNU7-138P-201ENST00000459479 64 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
USP47Q96K76 RNA5SP481-201ENST00000516814 122 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 RNU6-612P-201ENST00000516909 102 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.21□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms