Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 RNU6-497P-201ENST00000365316 104 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 AC096949.1-201ENST00000412047 152 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 RPS15AP28-201ENST00000435088 386 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 AC099677.2-201ENST00000436385 175 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 RPL23AP46-201ENST00000438548 490 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 RPS29P19-201ENST00000479709 171 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 RNA5SP112-201ENST00000515937 99 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 AC026403.1-201ENST00000518938 295 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 AC009093.8-201ENST00000641769 292 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 AC010266.2-201ENST00000564741 3255 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 ZNF271P-202ENST00000465539 1970 ntBASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
MS4A4AQ96JQ5 AL049781.1-201ENST00000623195 3585 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 AC073261.1-201ENST00000429409 121 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 Z98742.2-201ENST00000431564 187 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 AC006011.1-201ENST00000442758 349 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 SNRPGP5-201ENST00000456003 220 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 RNU7-123P-201ENST00000515911 60 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 RNU2-58P-201ENST00000516403 183 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 RNA5SP230-201ENST00000517039 122 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 AC022254.1-201ENST00000567857 235 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 MIR3683-201ENST00000580847 82 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 MIR376A2-201ENST00000636782 80 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 AC018630.2-201ENST00000534866 2403 ntBASIC4.81□□□□□ -1.64
MS4A4AQ96JQ5 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 RNU6-1099P-201ENST00000363533 107 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 U8.11-201ENST00000384699 133 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 SNORD66.1-201ENST00000391230 76 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 AC233266.1-201ENST00000454518 96 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 U8.18-201ENST00000459285 133 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 SNORA4.4-201ENST00000515921 135 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 RNU1-95P-201ENST00000516357 160 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 SCARNA13-201ENST00000516672 275 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 RNU1-128P-201ENST00000516704 160 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 MIR3200-201ENST00000580767 85 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 MIR4305-201ENST00000583252 102 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 AC090115.4-201ENST00000609970 188 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 AC019176.2-201ENST00000611579 315 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 AC242852.1-201ENST00000612151 96 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 AC012314.7-201ENST00000619693 93 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 AC244015.1-201ENST00000622301 99 ntBASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
MS4A4AQ96JQ5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 MIR30B-201ENST00000384850 88 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 MIR483-201ENST00000385070 76 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 AL451046.2-201ENST00000403074 277 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 RNA5SP296-201ENST00000410523 111 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 MIR1911-201ENST00000410783 80 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 RNU6-938P-201ENST00000411285 103 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 PPBPP1-201ENST00000510807 373 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 RNU7-61P-201ENST00000515897 61 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 AL358944.1-201ENST00000528537 144 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 MIR4660-201ENST00000583549 74 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 MIR4765-201ENST00000585007 77 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 AC073413.2-201ENST00000604332 360 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 MAPK10-372ENST00000641954 3413 ntBASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MS4A4AQ96JQ5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms