Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 Y_RNA.76-201ENST00000362931 109 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 RNU6-378P-201ENST00000384324 107 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 MIR887-201ENST00000401258 79 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 CBX3P9-201ENST00000402326 552 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 MTND5P15-201ENST00000434246 349 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 RRN3P3-201ENST00000549207 578 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 AC025281.1-201ENST00000567026 265 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 AC105137.2-201ENST00000569073 466 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 MIR5004-201ENST00000579078 107 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 AL356575.1-201ENST00000603008 283 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 AL034555.1-201ENST00000604816 211 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 AC006111.3-201ENST00000622137 383 ntBASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CHAMP1Q96JM3 MAPK10-322ENST00000641485 4530 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 MTND5P35-201ENST00000557537 1720 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 Y_RNA.117-201ENST00000363294 101 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 RNU6-1175P-201ENST00000365200 107 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 RNU6-245P-201ENST00000384020 107 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 Y_RNA.595-201ENST00000410403 105 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 ELOCP21-201ENST00000412558 336 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 AL513477.1-202ENST00000417061 214 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 RPL23AP70-201ENST00000483361 460 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 RNU6-966P-201ENST00000516479 104 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 Y_RNA.683-201ENST00000516508 93 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 RNU7-110P-201ENST00000516891 62 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 RNU2-31P-201ENST00000516954 155 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 SNORA81.3-201ENST00000517283 198 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 AC099778.2-201ENST00000610904 211 ntBASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.42□□□□□ -1.86
CHAMP1Q96JM3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 AL136360.1-201ENST00000503377 1900 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 RNU4-15P-201ENST00000362613 141 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 SNORD15B-201ENST00000384714 146 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 RPL19P1-201ENST00000411635 428 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 SUMO1P3-201ENST00000439961 304 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 AC091179.3-201ENST00000474761 144 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 MIR3923-201ENST00000579521 83 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 AC093732.2-201ENST00000607950 274 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 AL365434.2-201ENST00000607979 234 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHAMP1Q96JM3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CHAMP1Q96JM3 Y_RNA.44-201ENST00000362676 108 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 RNU1-35P-201ENST00000362782 153 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 SNORD114-19-201ENST00000363072 75 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 Y_RNA.179-201ENST00000363844 90 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 Y_RNA.200-201ENST00000364018 102 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 Y_RNA.569-201ENST00000384749 103 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 MIR208B-201ENST00000401172 77 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AL033519.2-201ENST00000403958 392 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AL603908.1-201ENST00000406098 201 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AL390729.2-201ENST00000416137 156 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 HMGN2P20-201ENST00000437531 273 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AC107083.1-201ENST00000439643 279 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AL031183.1-201ENST00000457667 207 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AP001324.2-201ENST00000461163 319 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AC103975.1-201ENST00000482506 483 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AC074133.1-201ENST00000515696 183 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AC008749.1-201ENST00000597650 306 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AL033523.1-201ENST00000605153 153 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 AC022441.3-201ENST00000605737 136 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 FTX_2.1-201ENST00000618816 94 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHAMP1Q96JM3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 AC135776.4-201ENST00000624300 1904 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 MIR22-201ENST00000362190 85 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 Y_RNA.297-201ENST00000364950 91 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 Y_RNA.418-201ENST00000384029 102 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 SNORA44-201ENST00000384584 132 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 RNU6-21P-201ENST00000384710 107 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 MIR504-201ENST00000385065 83 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 SNORA53-201ENST00000391141 249 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 MIR1298-201ENST00000408783 112 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 RNA5SP274-201ENST00000410484 108 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 RNU6-651P-201ENST00000411040 105 ntBASIC3.39□□□□□ -1.87
CHAMP1Q96JM3 RNA5SP247-201ENST00000411181 105 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 343.2 ms