Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC011476.5-201ENST00000615594 130 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 AC005296.1-201ENST00000616145 209 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 AL449363.1-201ENST00000617815 186 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 AC243829.7-201ENST00000633081 225 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 U6.92-201ENST00000636464 89 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS50Q96JG6 AC010329.5-201ENST00000623497 2174 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS50Q96JG6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 Y_RNA.27-201ENST00000362540 103 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 RNA5SP393-201ENST00000363423 117 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 Y_RNA.512-201ENST00000384518 102 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 AC063976.3-201ENST00000426849 329 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 AC007215.1-201ENST00000464893 276 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 MRPS35P2-201ENST00000508242 191 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 AC091826.1-201ENST00000514065 313 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 SCARNA3-201ENST00000517097 143 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 AC093023.1-201ENST00000547375 507 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 RPS29P30-201ENST00000600975 111 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 AC090517.3-201ENST00000625170 141 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VPS50Q96JG6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS50Q96JG6 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
VPS50Q96JG6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS50Q96JG6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS50Q96JG6 Z82209.1-201ENST00000422141 2135 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 Y_RNA.26-201ENST00000362539 101 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 RNU6-926P-201ENST00000384075 107 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 Y_RNA.458-201ENST00000384240 102 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 Y_RNA.471-201ENST00000384312 102 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 RNY3P4-201ENST00000384428 101 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 AC004866.1-201ENST00000411748 78 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 MICF-203ENST00000432679 129 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 AL135938.1-201ENST00000443141 297 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 RNA5SP356-201ENST00000515972 94 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 RNU6-635P-201ENST00000516651 102 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 AL713866.2-201ENST00000603579 219 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 AL138963.2-201ENST00000605137 226 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 MIR6852-201ENST00000621699 66 ntBASIC2.68□□□□□ -1.98
VPS50Q96JG6 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS50Q96JG6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS50Q96JG6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS50Q96JG6 RNU6-238P-201ENST00000363313 106 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 RNU4-50P-201ENST00000364361 141 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 RNU6-806P-201ENST00000365147 105 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 Y_RNA.380-201ENST00000365663 111 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS50Q96JG6 Y_RNA.551-201ENST00000384661 102 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 MIR329-1-201ENST00000385028 80 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 MIR9-1-201ENST00000385198 89 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 ELOCP20-201ENST00000422460 345 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS50Q96JG6 RPEP5-201ENST00000441137 268 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 UBE2DNL-203ENST00000474922 222 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 RPS29P26-201ENST00000477483 171 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 SNORA25.14-201ENST00000516481 132 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 MIR2355-201ENST00000517199 87 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 HSPE1P18-201ENST00000517602 280 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 AC034114.1-201ENST00000520293 285 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 AC027176.1-201ENST00000560204 514 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS50Q96JG6 AL390123.1-201ENST00000603216 237 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 AC006023.1-201ENST00000603944 259 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 AL355297.3-201ENST00000604082 446 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 AC008121.3-201ENST00000618726 433 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.67□□□□□ -1.98
VPS50Q96JG6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS50Q96JG6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS50Q96JG6 Y_RNA.47-201ENST00000362697 108 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 RNU1-76P-201ENST00000362903 159 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 RNU6-137P-201ENST00000363680 108 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 U3.9-201ENST00000363823 204 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 RNU6-944P-201ENST00000364023 107 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 Y_RNA.214-201ENST00000364201 112 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 AC027124.2-201ENST00000428249 105 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS50Q96JG6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS50Q96JG6 AC010095.1-201ENST00000443543 144 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.66□□□□□ -1.98
VPS50Q96JG6 RNU7-26P-201ENST00000458980 63 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 RNU6-1012P-201ENST00000516606 109 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 RNA5SP54-201ENST00000516951 92 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 RNU6-897P-201ENST00000517135 105 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS50Q96JG6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS50Q96JG6 MIR3162-201ENST00000581818 82 ntBASIC2.66□□□□□ -1.98
VPS50Q96JG6 AC105245.1-201ENST00000581934 244 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms