Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 U3.44-201ENST00000458938 192 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 Vault.1-201ENST00000516474 102 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 AL110118.1-201ENST00000553543 400 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 CTSLP2-204ENST00000629029 392 ntBASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.62□□□□□ -1.67
MS4A3Q96HJ5 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 RNU6-161P-201ENST00000363051 106 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 RN7SKP113-201ENST00000363891 295 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 RNU6-865P-201ENST00000364772 107 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 Y_RNA.532-201ENST00000384590 113 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 PTMAP2-201ENST00000397627 327 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 RNA5SP112-201ENST00000515937 99 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 RNA5SP464-201ENST00000516251 108 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 SUMO2P15-201ENST00000604285 278 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 uc_338.25-201ENST00000613756 156 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 MIR6076-201ENST00000617521 113 ntBASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MS4A3Q96HJ5 AF117829.1-206ENST00000621883 3802 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 RNU1-43P-201ENST00000365052 165 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 Y_RNA.332-201ENST00000365271 113 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 RNU6-424P-201ENST00000384367 105 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 BX510359.3-201ENST00000422168 306 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 SNORD4B-201ENST00000459083 72 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 RPS21P4-201ENST00000487122 248 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 MIR3690-201ENST00000580266 75 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 MIR4765-201ENST00000585007 77 ntBASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.6□□□□□ -1.67
MS4A3Q96HJ5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 SNORA48.4-201ENST00000391089 134 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 SNORA26.6-201ENST00000391256 115 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 RNA5SP482-201ENST00000391269 118 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 MIR1178-201ENST00000408396 91 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 MIR1271-201ENST00000408537 86 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 RPS29P10-201ENST00000439197 166 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 RN7SL172P-201ENST00000460535 303 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 RN7SL30P-201ENST00000488416 306 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 RNU6-826P-201ENST00000516827 104 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 RNA5SP34-201ENST00000516887 130 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 AC012676.2-201ENST00000619258 186 ntBASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MS4A3Q96HJ5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
MS4A3Q96HJ5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
MS4A3Q96HJ5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 RNU1-19P-201ENST00000363306 165 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 SNORA70.7-201ENST00000384159 133 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 MIR1267-201ENST00000408723 78 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 RNU6-1190P-201ENST00000410811 104 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 AC008953.1-201ENST00000497334 318 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 AC234781.5-201ENST00000508429 271 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 AL592156.1-201ENST00000508758 304 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 AP000867.2-201ENST00000532468 320 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 DNAJC19P9-201ENST00000555084 351 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 MIR4484-201ENST00000582855 83 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 FAM106DP-201ENST00000586416 501 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 MIR338-201ENST00000636369 67 ntBASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MS4A3Q96HJ5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms