Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL355796.1-201ENST00000406706 323 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.14□□□□□ -2.39
TTC28Q96AY4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.14□□□□□ -2.39
TTC28Q96AY4 snoU13.13-201ENST00000458842 104 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 AC119751.4-201ENST00000507498 357 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 SNORD79.1-201ENST00000516069 84 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 RNA5SP168-201ENST00000516642 112 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 RNU6-197P-201ENST00000516680 100 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 MIR5093-201ENST00000583199 100 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 AC090186.1-201ENST00000605991 572 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 RNU6-88P-201ENST00000606801 100 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 MIR15A-201ENST00000607334 83 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 AC092574.1-201ENST00000609771 420 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 AC104073.3-201ENST00000610942 955 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 AC092106.3-201ENST00000611308 722 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.14□□□□□ -2.39
TTC28Q96AY4 MIR103A1-201ENST00000362165 78 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 Y_RNA.6-201ENST00000362350 114 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 SNORD115-24-201ENST00000363528 82 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNU5A-8P-201ENST00000364102 114 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNA5SP192-201ENST00000364404 120 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 SNORD32B-201ENST00000364460 84 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNY4P10-201ENST00000365571 96 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 SNORA36.2-201ENST00000384004 127 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNU6-207P-201ENST00000384137 107 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNU6-110P-201ENST00000384508 104 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 Y_RNA.512-201ENST00000384518 102 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNY3P9-201ENST00000384727 106 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 SNORA12.2-201ENST00000391040 156 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 UBE2V1P15-201ENST00000407776 448 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNU2-62P-201ENST00000410868 191 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 AC063976.4-201ENST00000421971 163 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 MTCO3P29-201ENST00000432119 779 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 AL162395.1-201ENST00000457882 422 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 MTCO3P9-201ENST00000506989 781 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
TTC28Q96AY4 AC010587.2-201ENST00000511727 448 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 AC107027.2-201ENST00000512197 115 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.13□□□□□ -2.39
TTC28Q96AY4 AC107304.1-201ENST00000604229 296 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 snoZ40.1-201ENST00000364540 72 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 SNORA16.2-201ENST00000390991 127 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 AL365338.1-201ENST00000422282 858 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 MTCO2P18-201ENST00000457151 658 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNU4-54P-201ENST00000516428 129 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNU6-118P-201ENST00000516552 102 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.13□□□□□ -2.39
TTC28Q96AY4 AL138889.2-201ENST00000603883 242 ntBASIC0.13□□□□□ -2.39
TTC28Q96AY4 RNU6-228P-201ENST00000362700 106 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 RNU6-946P-201ENST00000383878 107 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 MIR544A-201ENST00000384855 91 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 AF228730.1-201ENST00000397972 663 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.12□□□□□ -2.39
TTC28Q96AY4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.12□□□□□ -2.39
TTC28Q96AY4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.12□□□□□ -2.39
TTC28Q96AY4 Y_RNA.689-201ENST00000516589 107 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.12□□□□□ -2.39
TTC28Q96AY4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.12□□□□□ -2.39
TTC28Q96AY4 MIR4742-201ENST00000581069 85 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 snoU2-30.2-201ENST00000362805 70 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 RNU6-777P-201ENST00000364265 104 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 RNU5E-7P-201ENST00000365290 117 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 RNU4-48P-201ENST00000365559 182 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 RNU5E-6P-201ENST00000365574 115 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 MIR635-201ENST00000384830 98 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 MIR518A1-201ENST00000385068 85 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 RNA5SP219-201ENST00000390940 113 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.12□□□□□ -2.39
TTC28Q96AY4 MTCO3P41-201ENST00000414801 328 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 AC011233.1-201ENST00000422812 283 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 BTF3P11-201ENST00000426582 477 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
TTC28Q96AY4 RNU6-64P-201ENST00000517119 105 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 BNIP3P6-201ENST00000549284 499 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.12□□□□□ -2.39
TTC28Q96AY4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.12□□□□□ -2.39
TTC28Q96AY4 MIR3165-201ENST00000579874 75 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 AL445584.3-201ENST00000617173 78 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 AL078595.3-201ENST00000623815 1166 ntBASIC0.12□□□□□ -2.39
TTC28Q96AY4 CASC19-280ENST00000642102 1351 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 AC090625.1-201ENST00000357130 210 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 SNORD44.1-201ENST00000363202 61 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 RNU4-56P-201ENST00000364700 142 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 MIR10A-201ENST00000385043 110 ntBASIC0.11□□□□□ -2.39
TTC28Q96AY4 SNORA12.1-201ENST00000390873 148 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms