Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.9□□□□□ -1.94
HPS3Q969F9 Y_RNA.158-201ENST00000363651 101 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 RNU6-873P-201ENST00000363833 107 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 RNA5SP125-201ENST00000364843 120 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 SUMO1P4-201ENST00000429430 302 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 RPS27AP9-201ENST00000477681 438 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 SRIP1-201ENST00000489235 288 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.9□□□□□ -1.95
HPS3Q969F9 Y_RNA.721-201ENST00000517207 102 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.9□□□□□ -1.95
HPS3Q969F9 RPS29P30-201ENST00000600975 111 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 SNORD58B-201ENST00000607313 66 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HPS3Q969F9 Z82195.2-201ENST00000612348 18351 ntBASIC2.9□□□□□ -1.95
HPS3Q969F9 ZNF72P-201ENST00000425869 1908 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 SNORD14.1-201ENST00000365609 90 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 SNORA18.2-201ENST00000383865 132 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 Y_RNA.485-201ENST00000384395 102 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 AL139095.1-201ENST00000404326 391 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 RNU2-32P-201ENST00000411193 191 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS3Q969F9 CHEK2P4-201ENST00000450340 246 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 RPS23P5-201ENST00000495419 428 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 RNU2-44P-201ENST00000516795 194 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.89□□□□□ -1.95
HPS3Q969F9 AC093023.1-201ENST00000547375 507 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 AL442163.3-201ENST00000554110 156 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 ANP32BP3-201ENST00000559213 706 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 MIR5006-201ENST00000583027 110 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 MIR5188-201ENST00000583467 113 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS3Q969F9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS3Q969F9 AC091812.1-201ENST00000432235 1948 ntBASIC2.89□□□□□ -1.95
HPS3Q969F9 RNU6-281P-201ENST00000384212 103 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 MIR549A-201ENST00000385268 96 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 AL445305.1-201ENST00000432577 575 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 AC004386.2-201ENST00000441858 148 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.88□□□□□ -1.95
HPS3Q969F9 AC112492.4-201ENST00000456549 352 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 U8.22-201ENST00000459141 133 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 AC093852.1-201ENST00000503587 266 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 RNU5F-4P-201ENST00000516581 114 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.88□□□□□ -1.95
HPS3Q969F9 AC010999.1-201ENST00000611856 324 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 MTND4P1-201ENST00000457501 1466 ntBASIC2.88□□□□□ -1.95
HPS3Q969F9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HPS3Q969F9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HPS3Q969F9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
HPS3Q969F9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
HPS3Q969F9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.87□□□□□ -1.95
HPS3Q969F9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HPS3Q969F9 Y_RNA.27-201ENST00000362540 103 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 RNU1-62P-201ENST00000362599 164 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 RNU6-101P-201ENST00000410323 104 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 AC063976.3-201ENST00000426849 329 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 MTCO3P8-201ENST00000453691 755 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 RNA5SP282-201ENST00000516355 108 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 AC022616.8-201ENST00000533569 253 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 AP002770.2-201ENST00000543613 532 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 MIR4319-201ENST00000577285 85 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.87□□□□□ -1.95
HPS3Q969F9 AC104984.5-201ENST00000586878 94 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 AC022432.1-201ENST00000595739 310 ntBASIC2.87□□□□□ -1.95
HPS3Q969F9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.87□□□□□ -1.95
HPS3Q969F9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HPS3Q969F9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
HPS3Q969F9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HPS3Q969F9 RNU6-1301P-201ENST00000362724 104 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 Y_RNA.179-201ENST00000363844 90 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 Y_RNA.389-201ENST00000383924 113 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 RNU6-793P-201ENST00000384233 104 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 RNY3P4-201ENST00000384428 101 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 MIR9-1-201ENST00000385198 89 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HPS3Q969F9 RNA5SP213-201ENST00000391031 106 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS3Q969F9 ARL5AP4-201ENST00000430731 512 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 AC009237.7-201ENST00000447357 229 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.86□□□□□ -1.95
HPS3Q969F9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS3Q969F9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS3Q969F9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.86□□□□□ -1.95
HPS3Q969F9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.86□□□□□ -1.95
HPS3Q969F9 RNU6-826P-201ENST00000516827 104 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 CYCSP23-201ENST00000519781 313 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.86□□□□□ -1.95
HPS3Q969F9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS3Q969F9 U4atac.1-201ENST00000618345 95 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.86□□□□□ -1.95
HPS3Q969F9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HPS3Q969F9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.85□□□□□ -1.95
HPS3Q969F9 RNU1-23P-201ENST00000363361 144 ntBASIC2.85□□□□□ -1.95
HPS3Q969F9 RNU6-234P-201ENST00000365229 104 ntBASIC2.85□□□□□ -1.95
HPS3Q969F9 SNORA51.11-201ENST00000384442 131 ntBASIC2.85□□□□□ -1.95
HPS3Q969F9 MIR606-201ENST00000384851 96 ntBASIC2.85□□□□□ -1.95
HPS3Q969F9 Y_RNA.595-201ENST00000410403 105 ntBASIC2.85□□□□□ -1.95
HPS3Q969F9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.85□□□□□ -1.95
HPS3Q969F9 MIR449C-201ENST00000516047 92 ntBASIC2.85□□□□□ -1.95
HPS3Q969F9 SCARNA15.1-201ENST00000516384 125 ntBASIC2.85□□□□□ -1.95
HPS3Q969F9 RNU6-965P-201ENST00000516721 96 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms