Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CHEK2P4-201ENST00000450340 246 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 GSTA11P-201ENST00000452866 669 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 U8.22-201ENST00000459141 133 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 RPS27AP9-201ENST00000477681 438 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 AC132942.1-201ENST00000486753 483 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.54□□□□□ -2
HMGB4Q8WW32 MIR449C-201ENST00000516047 92 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 RNU6-965P-201ENST00000516721 96 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.54□□□□□ -2
HMGB4Q8WW32 MIR4719-201ENST00000585233 84 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 AC092447.9-201ENST00000603395 144 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 SNRPGP20-201ENST00000604477 205 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 TCL6_2.1-201ENST00000615162 119 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 AL132822.1-201ENST00000617063 513 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
HMGB4Q8WW32 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
HMGB4Q8WW32 RNU1-76P-201ENST00000362903 159 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 RNU6-873P-201ENST00000363833 107 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 RNU6-245P-201ENST00000384020 107 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.53□□□□□ -2
HMGB4Q8WW32 MCFD2P1-201ENST00000417812 300 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 EIF1P2-201ENST00000428233 350 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AL445305.1-201ENST00000432577 575 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AC004386.2-201ENST00000441858 148 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.53□□□□□ -2
HMGB4Q8WW32 AC096638.1-201ENST00000444678 216 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 RPL39P40-201ENST00000445481 146 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 MTND4P19-201ENST00000446659 478 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 MTCO3P8-201ENST00000453691 755 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 UBL5P3-201ENST00000475112 231 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AC107032.1-201ENST00000485945 480 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 RPS29P21-201ENST00000496272 170 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.53□□□□□ -2
HMGB4Q8WW32 RNU4-77P-201ENST00000516692 156 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 Y_RNA.711-201ENST00000516993 102 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 RN7SKP295-201ENST00000517264 153 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.53□□□□□ -2
HMGB4Q8WW32 ELOCP31-201ENST00000540463 467 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.53□□□□□ -2
HMGB4Q8WW32 MIR3171-201ENST00000584270 74 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AL356055.1-201ENST00000602528 446 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AC007485.1-201ENST00000616755 206 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 MIR7843-201ENST00000622274 79 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.53□□□□□ -2
HMGB4Q8WW32 MIR1248-201ENST00000629190 106 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 MIR4272-201ENST00000635924 64 ntBASIC2.53□□□□□ -2
HMGB4Q8WW32 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.53□□□□□ -2
HMGB4Q8WW32 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGB4Q8WW32 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HMGB4Q8WW32 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGB4Q8WW32 Y_RNA.132-201ENST00000363421 102 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 RNU6-280P-201ENST00000364145 104 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 RNU6-234P-201ENST00000365229 104 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 SNORA25B-201ENST00000365507 128 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 RNU6-281P-201ENST00000384212 103 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 RNU6-1011P-201ENST00000384668 107 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 MIR320B2-201ENST00000408479 138 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 RNA5SP425-201ENST00000410336 112 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 Y_RNA.605-201ENST00000410577 105 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 AC114482.1-201ENST00000418010 247 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 RNU7-169P-201ENST00000459456 61 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGB4Q8WW32 RNU2-44P-201ENST00000516795 194 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 AC007536.1-201ENST00000533382 349 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGB4Q8WW32 AC006157.1-201ENST00000611750 366 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
HMGB4Q8WW32 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HMGB4Q8WW32 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMGB4Q8WW32 Y_RNA.28-201ENST00000362554 111 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 Y_RNA.216-201ENST00000364205 93 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AC004866.1-201ENST00000411748 78 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AC096644.2-201ENST00000429278 159 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AC009238.1-201ENST00000442165 424 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AC009237.6-201ENST00000446969 424 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AL163540.1-201ENST00000485382 386 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.51□□□□□ -2.01
HMGB4Q8WW32 SNORA25.14-201ENST00000516481 132 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 RNU6-911P-201ENST00000516523 104 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 RNU6-1098P-201ENST00000516772 96 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 MIR2355-201ENST00000517199 87 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGB4Q8WW32 MIR5695-201ENST00000579717 85 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 MIR4658-201ENST00000584344 65 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AC125232.2-201ENST00000592457 143 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AC005296.1-201ENST00000616145 209 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 AL606534.2-204ENST00000635008 178 ntBASIC2.51□□□□□ -2.01
HMGB4Q8WW32 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMGB4Q8WW32 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HMGB4Q8WW32 Y_RNA.39-201ENST00000362620 98 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 Y_RNA.148-201ENST00000363557 117 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 SNORA22B-201ENST00000383876 138 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 MIR504-201ENST00000385065 83 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 AL135786.1-201ENST00000415892 214 ntBASIC2.5□□□□□ -2.01
HMGB4Q8WW32 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms