Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU6-1290P-201ENST00000362957 109 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 RNU6-1048P-201ENST00000364054 107 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 RNU6-151P-201ENST00000364158 107 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.287-201ENST00000364853 94 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 SNORA73.2-201ENST00000364946 201 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 MIR491-201ENST00000384877 84 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 MIR34B-201ENST00000385076 84 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 MIR634-201ENST00000385208 97 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 MIR569-201ENST00000385228 96 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 RNU6-239P-201ENST00000390990 99 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 Y_RNA.797-201ENST00000515977 94 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 RNU7-121P-201ENST00000516604 62 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 RNU2-44P-201ENST00000516795 194 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 AC090616.3-201ENST00000582184 217 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 AC069294.1-201ENST00000608397 350 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 AC008873.1-201ENST00000625051 138 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 AC134026.1-201ENST00000623249 2239 ntBASIC3.28□□□□□ -1.88
NUP43Q8NFH3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP43Q8NFH3 AC073346.2-201ENST00000624724 2058 ntBASIC3.28□□□□□ -1.89
NUP43Q8NFH3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 Y_RNA.368-201ENST00000365547 113 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 RNU1-57P-201ENST00000384491 166 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 MIR626-201ENST00000385032 94 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 RNU6-578P-201ENST00000390980 103 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 AL138878.1-201ENST00000405131 347 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 EBAG9P1-201ENST00000418955 543 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 CR769767.1-201ENST00000436337 346 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 U3.44-201ENST00000458938 192 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 AC112771.1-201ENST00000463581 102 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 AC104619.4-201ENST00000510773 249 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 SNORA74D-201ENST00000516404 141 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 RNU6-62P-201ENST00000516526 102 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 SNORA70.19-201ENST00000516717 90 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 SNORA70.24-201ENST00000517233 118 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 MIR4425-201ENST00000580572 84 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 U6.115-201ENST00000636045 103 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP43Q8NFH3 MFSD8-233ENST00000641482 4860 ntBASIC3.27□□□□□ -1.89
NUP43Q8NFH3 AC007496.3-201ENST00000624987 3443 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 AC091152.2-201ENST00000591628 2569 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 AC069528.2-201ENST00000624849 1991 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 SNORA22C-201ENST00000384614 134 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 Y_RNA.572-201ENST00000384757 98 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RNA5SP252-201ENST00000391131 119 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 AL355497.1-201ENST00000406262 551 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RNU6-257P-201ENST00000410238 98 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RNU6-710P-201ENST00000410424 105 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RNU6-735P-201ENST00000410612 107 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 AC093578.1-201ENST00000415219 368 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RNA5SP272-201ENST00000516095 111 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RNU6-313P-201ENST00000516317 112 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RNU1-95P-201ENST00000516357 160 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 RNU1-128P-201ENST00000516704 160 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 MIR4431-201ENST00000579990 94 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 MIR4744-201ENST00000581563 82 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 AC099778.2-201ENST00000610904 211 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 AC006111.3-201ENST00000622137 383 ntBASIC3.26□□□□□ -1.89
NUP43Q8NFH3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP43Q8NFH3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUP43Q8NFH3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 U3.8-201ENST00000363675 217 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 RNU6-103P-201ENST00000363686 107 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 Y_RNA.310-201ENST00000365063 113 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 SNORA5A-201ENST00000384111 134 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 SNORA8.3-201ENST00000384679 139 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 RNU6-417P-201ENST00000384712 107 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 MIR548B-201ENST00000385247 97 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 MIR591-201ENST00000385290 95 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 RNU6-1168P-201ENST00000390831 104 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 RNU6-1154P-201ENST00000391001 104 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 SNORA12-201ENST00000391162 147 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 AC010409.1-201ENST00000487382 476 ntBASIC3.25□□□□□ -1.89
NUP43Q8NFH3 AC079598.5-201ENST00000547460 117 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms