Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 AC096638.1-201ENST00000444678 216 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 LINC01399-202ENST00000458450 244 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 snoU13.14-201ENST00000459372 104 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 AC093023.1-201ENST00000547375 507 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 AC110588.1-201ENST00000559699 137 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 MIR3923-201ENST00000579521 83 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 MIR4659A-201ENST00000580269 81 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 AC073410.2-201ENST00000603240 332 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 AC240442.1-201ENST00000616055 283 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AC138915.1-201ENST00000565427 1685 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 OR56A5-201ENST00000340110 738 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 RNA5SP361-201ENST00000362686 118 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.105-201ENST00000363182 111 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 SNORD115-8-201ENST00000363856 82 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 SNORD115-38-201ENST00000365037 82 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 SNORD78.2-201ENST00000391076 69 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 MIR208B-201ENST00000401172 77 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 CBX3P9-201ENST00000402326 552 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 NDUFB4P4-201ENST00000404822 243 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 MIR1302-6-201ENST00000408466 90 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 RPS26P42-201ENST00000413485 326 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AIMP1P2-201ENST00000425294 312 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AC105272.1-201ENST00000438604 198 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 Z96811.1-201ENST00000445880 108 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 RNA5SP282-201ENST00000516355 108 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 RNA5SP54-201ENST00000516951 92 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AC079598.5-201ENST00000547460 117 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AC023824.2-201ENST00000566185 400 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AL034555.1-201ENST00000604816 211 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.772-201ENST00000606692 102 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AC011476.5-201ENST00000615594 130 ntBASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLIP4Q8N3C7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.143-201ENST00000363520 106 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.376-201ENST00000365638 108 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.461-201ENST00000384263 103 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 RNU6-378P-201ENST00000384324 107 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 RNU1-57P-201ENST00000384491 166 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 MIR549A-201ENST00000385268 96 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 SNORD12B-201ENST00000410433 91 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 RNU6-121P-201ENST00000410525 99 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.618-201ENST00000410949 107 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 AC097463.2-201ENST00000421074 142 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 AC098869.1-201ENST00000481627 292 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.713-201ENST00000517013 96 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 AP003733.2-201ENST00000529409 171 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 AL033523.1-201ENST00000605153 153 ntBASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.38□□□□□ -2.03
CLIP4Q8N3C7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 ZNF204P-201ENST00000416749 2397 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 AL359854.1-201ENST00000614203 1594 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RNU6-655P-201ENST00000362858 107 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RNU6-873P-201ENST00000363833 107 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.188-201ENST00000363952 111 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RNU6-280P-201ENST00000364145 104 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RNU6-461P-201ENST00000364195 107 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RNU6-472P-201ENST00000384299 107 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 MT-TW-201ENST00000387382 68 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 AL079342.1-201ENST00000401460 267 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RNU2-20P-201ENST00000410425 191 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 AL513477.1-202ENST00000417061 214 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 CBX3P6-201ENST00000430257 527 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 AC107083.1-201ENST00000439643 279 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 UBBP3-201ENST00000445497 241 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 AC007215.1-201ENST00000464893 276 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 AL121594.1-201ENST00000475906 575 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RPL23AP70-201ENST00000483361 460 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 AC107222.1-201ENST00000510899 637 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.668-201ENST00000516233 93 ntBASIC2.37□□□□□ -2.03
CLIP4Q8N3C7 RNU2-53P-201ENST00000516257 147 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms