Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SNORD78.2-201ENST00000391076 69 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 BPY2DP-201ENST00000422208 265 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 HMGN2P20-201ENST00000437531 273 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 AL714022.1-201ENST00000439897 151 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.2□□□□□ -1.9
SYNE4Q8N205 RPL23AP49-201ENST00000492925 468 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 AC107393.1-201ENST00000512403 346 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 Y_RNA.700-201ENST00000516806 100 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
SYNE4Q8N205 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNE4Q8N205 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNE4Q8N205 Y_RNA.772-201ENST00000606692 102 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 AL138880.2-201ENST00000616214 239 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 SCARNA4-202ENST00000625402 129 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNE4Q8N205 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYNE4Q8N205 HAUS6P2-201ENST00000433254 2404 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
SYNE4Q8N205 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYNE4Q8N205 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNE4Q8N205 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SYNE4Q8N205 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SYNE4Q8N205 AC135776.4-201ENST00000624300 1904 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYNE4Q8N205 RNU6-527P-201ENST00000363425 104 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 Y_RNA.270-201ENST00000364693 104 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 SNORA36A-201ENST00000384221 132 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 RNU6-198P-201ENST00000384258 104 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 RNA5SP425-201ENST00000410336 112 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 AC005002.2-201ENST00000438228 269 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 AL353705.4-201ENST00000449661 238 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNE4Q8N205 AC074198.2-201ENST00000508153 258 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 SERF1AP1-201ENST00000514575 187 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 CBX3P4-201ENST00000538909 354 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 UBL5P4-201ENST00000562584 236 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 MIR4648-201ENST00000580107 72 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 BX284668.6-201ENST00000606899 438 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNE4Q8N205 MIR7111-201ENST00000619751 72 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 AL161431.1-201ENST00000618966 4205 ntBASIC3.19□□□□□ -1.9
SYNE4Q8N205 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.19□□□□□ -1.9
SYNE4Q8N205 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYNE4Q8N205 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SYNE4Q8N205 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
SYNE4Q8N205 RNU6-290P-201ENST00000365212 101 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 RNU6-1286P-201ENST00000383871 107 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 SNORA29-201ENST00000384183 140 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 U8.10-201ENST00000384260 133 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 AL512633.1-201ENST00000399931 655 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNE4Q8N205 AC016700.2-201ENST00000446011 156 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 HMGN2P10-201ENST00000448085 265 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNE4Q8N205 AC087477.1-201ENST00000465747 340 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 RPL26P26-201ENST00000480251 434 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 SNORD116-28-201ENST00000516123 91 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 AC022559.1-201ENST00000520905 205 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 AC027288.2-201ENST00000553028 243 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 U4.3-201ENST00000621047 82 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 AC127459.3-201ENST00000624328 466 ntBASIC3.18□□□□□ -1.9
SYNE4Q8N205 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNE4Q8N205 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYNE4Q8N205 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SYNE4Q8N205 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYNE4Q8N205 AC110491.1-201ENST00000562191 2010 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYNE4Q8N205 AC010680.1-201ENST00000590024 3590 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 MIR411-201ENST00000362239 96 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 Y_RNA.83-201ENST00000363005 113 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 RNU6-879P-201ENST00000364328 108 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 RNU1-100P-201ENST00000365255 165 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 RNU6-843P-201ENST00000384454 104 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 RNA5SP210-201ENST00000391034 120 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 RNU6-1077P-201ENST00000410506 102 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 AC023141.4-201ENST00000412031 328 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 AL591043.1-201ENST00000432461 424 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 RPS15AP7-201ENST00000439294 405 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 Y_RNA.644-201ENST00000459006 113 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.17□□□□□ -1.9
SYNE4Q8N205 Y_RNA.674-201ENST00000516362 113 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 SNORA9.3-201ENST00000516383 129 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 MIR2355-201ENST00000517199 87 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 AC091144.1-201ENST00000519573 138 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 CKS1BP7-201ENST00000522230 235 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 AP004607.1-201ENST00000524456 203 ntBASIC3.17□□□□□ -1.9
SYNE4Q8N205 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SYNE4Q8N205 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYNE4Q8N205 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SYNE4Q8N205 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNE4Q8N205 SNORD56.1-201ENST00000362913 68 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 RNU5B-2P-201ENST00000363036 113 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 Y_RNA.164-201ENST00000363709 102 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 RNU6-682P-201ENST00000363843 106 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 RNU6-47P-201ENST00000383866 107 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 SNORD116-20-201ENST00000384529 92 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms