Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MIR449C-201ENST00000516047 92 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AP003033.1-201ENST00000527244 415 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AC025423.5-201ENST00000550230 219 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 MIR6840-201ENST00000611937 71 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AL136221.1-201ENST00000621449 509 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AC009033.1-201ENST00000624279 431 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 MTND4P5-201ENST00000435821 1374 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AL596028.1-201ENST00000326971 197 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 RNU1-22P-201ENST00000363334 158 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 RNU6-1303P-201ENST00000364841 107 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 RNU1-148P-201ENST00000384472 162 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 SNORD115-47-201ENST00000391226 86 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AL033519.2-201ENST00000403958 392 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 MTND3P9-201ENST00000429526 346 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 DAP3P1-201ENST00000441522 278 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AC007395.1-201ENST00000451333 677 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 PTP4A1P4-201ENST00000512479 322 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 SNORA48.11-201ENST00000517015 89 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AP000763.2-201ENST00000540641 163 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 ANP32BP3-201ENST00000559213 706 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 MIR5696-201ENST00000578474 85 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AC100830.2-201ENST00000581636 240 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AC018638.8-201ENST00000588755 281 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 7SK.7-201ENST00000603504 247 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 RNU1-52P-201ENST00000384190 164 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 MIR186-201ENST00000384988 86 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 RNA5SP212-201ENST00000391223 107 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 CBX3P6-201ENST00000430257 527 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 SNRPGP13-201ENST00000442212 177 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 PCMTD1P1-201ENST00000455560 355 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 AL121594.1-201ENST00000475906 575 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 RNU6-864P-201ENST00000516256 108 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 Y_RNA.675-201ENST00000516389 149 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 RNU6-1198P-201ENST00000516904 67 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 AC093913.1-201ENST00000614178 329 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 AL132822.1-201ENST00000617063 513 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 AC137590.2-201ENST00000619709 240 ntBASIC1.28□□□□□ -2.2
COL27A1Q8IZC6 CENPCP1-201ENST00000533085 2578 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 RNU6-1286P-201ENST00000383871 107 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 SNORD116-11-201ENST00000383882 92 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 U3.40-201ENST00000408706 208 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 SRIP3-201ENST00000413200 219 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 MRPS10P2-201ENST00000431226 381 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 GPM6BP3-201ENST00000442797 145 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 RPL23AP3-201ENST00000453844 468 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 RNA5SP54-201ENST00000516951 92 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 POLR3GP2-201ENST00000588366 668 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AL121757.2-201ENST00000611223 313 ntBASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.27□□□□□ -2.21
COL27A1Q8IZC6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 RNU6-593P-201ENST00000364716 112 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 Y_RNA.301-201ENST00000364990 103 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 RNU6-360P-201ENST00000390944 104 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 MIR1262-201ENST00000408276 93 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 snoU13.30-201ENST00000458951 104 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 ATP5EP1-201ENST00000510257 156 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 RNU4-49P-201ENST00000516080 140 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 MRPS36P4-201ENST00000534436 298 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 HSPE1P4-201ENST00000550617 308 ntBASIC1.26□□□□□ -2.21
COL27A1Q8IZC6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms